| Transcript ID | Colon | Muscle |
|---|---|---|
| ENST00000601393 | 20.773±0.00 | 17.393±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | small nuclear ribonucleoprotein polypeptide A | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000601393  |
SNRPA-006 |
ENSG00000077312 |
9606 | + |
19:40751209-40765150  |
protein_coding |
Expression Patterns
|
Conserved Regions |
|---|
| Gene is not located within a conserved region. |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000166 | IEA | nucleotide binding |
| GO:0000398 | IEA | mRNA splicing, via spliceosome |
| GO:0003676 | IEA | nucleic acid binding |
| GO:0005634 | IDA | nucleus |
| GO:0005730 | IDA | nucleolus |
| GO:0005737 | IDA | cytoplasm |
| GO:0017069 | IEA | snRNA binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000163311
|
Snrpa-201 | protein_coding | Mus_musculus | 0 | 660 |
|
ENSMUST00000080356
|
Snrpa-001 | protein_coding | Mus_musculus | 0 | 660 |
|
ENSMUST00000122202
|
Snrpa-002 | protein_coding | Mus_musculus | 0 | 660 |
|
ENSMUST00000095633
|
Gm5145-201 | protein_coding | Mus_musculus | 0 | 603 |
|
ENSMUST00000190584
|
RP23-192P10.1-001 | processed_pseudogene | Mus_musculus | 0 | 556 |
|
ENSMUST00000148491
|
Snrpa-005 | retained_intron | Mus_musculus | 0 | 302 |
|
ENSMUST00000126211
|
Snrpa-003 | protein_coding | Mus_musculus | 0 | 285 |
|
ENSDART00000012018
|
snrpa-201 | protein_coding | Danio_rerio | 0 | 283 |
|
ENSMUST00000076538
|
Gm8587-201 | processed_pseudogene | Mus_musculus | 0 | 270 |
|
ENSMUST00000075243
|
Gm5161-001 | processed_pseudogene | Mus_musculus | 0 | 263 |
|
ENSMUST00000141378
|
Snrpa-004 | nonsense_mediated_decay | Mus_musculus | 1e-37 | 161 |
