C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: seizure threshold 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000075406 Szt2-001 ENSMUSG00000033253 10090 - 4:118362743-118409273 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000075406
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000075406 3.646±1.55 7.222±0.81 1.834±0.21 6.445±3.29 6.103±2.04 6.903±0.67 1.993±0.37 3.304±0.52 2.048±0.61 10.722±0.99 1.295±0.27 8.412±2.26 1.976±1.16 2.250±0.81

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005777 IDA peroxisome
GO:0007417 IMP central nervous system development
GO:0009791 IMP post-embryonic development
GO:0021540 IEA corpus callosum morphogenesis
GO:0043473 IMP pigmentation
GO:0070062 IEA extracellular vesicular exosome
GO:1901668 IMP regulation of superoxide dismutase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000357658 SZT2-001 retained_intron Homo_sapiens 0 699
ENST00000372450 SZT2-002 protein_coding Homo_sapiens 0 665
ENST00000406439 SZT2-003 nonsense_mediated_decay Homo_sapiens 0 625
ENST00000460536 SZT2-009 retained_intron Homo_sapiens 0 1886
ENST00000470139 SZT2-005 retained_intron Homo_sapiens 0 2135
ENST00000470897 SZT2-007 retained_intron Homo_sapiens 0 231
ENST00000471177 SZT2-008 processed_transcript Homo_sapiens 0 492
ENST00000478140 SZT2-006 retained_intron Homo_sapiens 0 459
ENST00000562955 SZT2-004 protein_coding Homo_sapiens 0 8163

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