C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: FERM domain containing 4A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000075767 Frmd4a-001 ENSMUSG00000026657 10090 + 2:4400975-4614043 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainHeartLiverMusclePlacentaTestisENSMUST00000075767
Transcript ID Adrenal Bladder Brain Heart Liver Muscle Placenta Testis
ENSMUST00000075767 0.714±0.00 0.836±0.00 14.837±1.79 1.574±0.06 2.234±0.00 0.083±0.00 1.440±0.00 0.570±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000870 CIL_000870_0002 VISTA 2:3997327-4601456

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0005923 IDA tight junction
GO:0030674 IPI protein binding, bridging
GO:0090162 IGI establishment of epithelial cell polarity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264546 FRMD4A-005 protein_coding Homo_sapiens 0 1899
ENST00000342409 FRMD4A-004 protein_coding Homo_sapiens 0 1400
ENST00000357447 FRMD4A-003 protein_coding Homo_sapiens 0 4466
ENST00000358621 FRMD4A-201 protein_coding Homo_sapiens 0 4464
ENST00000419851 RP11-295P9.3-003 retained_intron Homo_sapiens 0 472
ENST00000475325 FRMD4A-011 processed_transcript Homo_sapiens 0 484
ENST00000477221 FRMD4A-008 processed_transcript Homo_sapiens 0 353
ENST00000492155 FRMD4A-007 processed_transcript Homo_sapiens 0 470
ENST00000495956 FRMD4A-010 processed_transcript Homo_sapiens 0 789
ENST00000594575 RP11-295P9.3-014 retained_intron Homo_sapiens 0 248
ENST00000597920 RP11-295P9.3-015 retained_intron Homo_sapiens 1e-37 161
ENST00000600249 RP11-295P9.3-017 processed_transcript Homo_sapiens 4e-21 106
ENST00000601075 RP11-295P9.3-010 processed_transcript Homo_sapiens 4e-21 106
ENST00000610032 RP11-295P9.3-023 processed_transcript Homo_sapiens 0 734
ENST00000610395 RP11-295P9.3-026 retained_intron Homo_sapiens 0 333
ENST00000613191 RP11-295P9.3-038 processed_transcript Homo_sapiens 0 265
ENST00000613332 RP11-295P9.3-044 processed_transcript Homo_sapiens 9.99967e-42 174
ENST00000614991 RP11-295P9.3-060 retained_intron Homo_sapiens 4e-32 143
ENST00000619389 RP11-295P9.3-030 processed_transcript Homo_sapiens 1e-39 167
ENST00000621532 RP11-295P9.3-029 retained_intron Homo_sapiens 5.60519e-45 185

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