C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger CCHC-type and RNA binding motif 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000076070 Zcrb1-001 ENSMUSG00000022635 10090 - 15:93386106-93398334 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000076070
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000076070 6.997±0.53 41.668±8.97 38.812±1.53 35.090±2.80 10.690±5.64 17.611±3.61 13.726±3.99 8.578±2.21 20.533±15.09 17.424±7.68 47.838±1.89 12.074±6.22 35.660±12.50 12.363±2.55

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000468 CIL_000468_0002 CGP 15:93284278-93398334

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005689 ISS U12-type spliceosomal complex
GO:0006397 IEA mRNA processing
GO:0008270 IEA zinc ion binding
GO:0008380 IEA RNA splicing
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000266529 ZCRB1-001 protein_coding Homo_sapiens 0 843
ENST00000552235 ZCRB1-002 protein_coding Homo_sapiens 0 590
ENST00000552673 ZCRB1-005 protein_coding Homo_sapiens 0 726

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