C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rab acceptor 1 (prenylated)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000076961 Rabac1-201 ENSMUSG00000003380 10090 - 7:24969750-24972728 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000076961
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000076961 237.016±40.25 364.333±32.87 224.516±29.34 73.827±36.00 278.813±79.84 185.689±26.15 190.556±23.63 261.804±21.38 79.396±21.38 406.344±50.24 110.993±7.18 270.803±128.05 81.568±48.86 99.098±48.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003VE CIL_0003VE_0002 CGP 7:24902912-24972728
CIL_00030U CIL_00030U_0002 CGP 7:24969750-25005957

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005794 IDA Golgi apparatus
GO:0005886 IEA plasma membrane
GO:0008022 IEA protein C-terminus binding
GO:0016020 IEA membrane
GO:0016021 IDA integral component of membrane
GO:0030054 IEA cell junction
GO:0031410 IEA cytoplasmic vesicle
GO:0042802 IEA identical protein binding
GO:0045202 IEA synapse
GO:0070064 IEA proline-rich region binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000222008 RABAC1-001 protein_coding Homo_sapiens 0 750
ENST00000596171 RABAC1-002 retained_intron Homo_sapiens 0 510
ENST00000599219 RABAC1-003 retained_intron Homo_sapiens 0 405
ENST00000600292 RABAC1-007 protein_coding Homo_sapiens 0 568
ENST00000601078 RABAC1-005 protein_coding Homo_sapiens 0 656
ENST00000601476 RABAC1-006 retained_intron Homo_sapiens 0 444
ENST00000601891 RABAC1-004 protein_coding Homo_sapiens 0 486

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