C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glomulin, FKBP associated protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000370360 GLMN-001 ENSG00000174842 9606 - 1:92246402-92298976 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonOvaryPlacentaTestisENST00000370360
Transcript ID Adipose Brain Colon Ovary Placenta Testis
ENST00000370360 1.044±0.00 1.711±0.00 1.288±0.00 2.227±0.28 1.157±0.05 3.272±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007CA CIL_0007CA_0002 CGP 1:92217940-92298987
CIL_0005ZN CIL_0005ZN_0001 CGP 1:92246402-92402056

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001570 IMP vasculogenesis
GO:0001843 IEA neural tube closure
GO:0005171 IPI hepatocyte growth factor receptor binding
GO:0005515 IPI protein binding
GO:0005622 NAS intracellular
GO:0031397 IGI negative regulation of protein ubiquitination
GO:0031461 IPI cullin-RING ubiquitin ligase complex
GO:0031462 IPI Cul2-RING ubiquitin ligase complex
GO:0031463 IPI Cul3-RING ubiquitin ligase complex
GO:0031464 IPI Cul4A-RING E3 ubiquitin ligase complex
GO:0031625 IDA ubiquitin protein ligase binding
GO:0032434 IMP regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0040029 IMP regulation of gene expression, epigenetic
GO:0042130 IDA negative regulation of T cell proliferation
GO:0042327 IDA positive regulation of phosphorylation
GO:0042692 IMP muscle cell differentiation
GO:0045086 IMP positive regulation of interleukin-2 biosynthetic process
GO:0050715 IMP positive regulation of cytokine secretion
GO:0055105 IGI ubiquitin-protein transferase inhibitor activity
GO:0072359 IEA circulatory system development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000082121 Glmn-002 protein_coding Mus_musculus 0 1960
ENSMUST00000078021 Glmn-001 protein_coding Mus_musculus 0 1960
ENSMUST00000124546 Glmn-006 nonsense_mediated_decay Mus_musculus 0 1888
ENSMUST00000100949 Glmn-005 protein_coding Mus_musculus 0 1315
ENSMUST00000148505 Glmn-008 processed_transcript Mus_musculus 0 667
ENSMUST00000137939 Glmn-004 retained_intron Mus_musculus 0 388
ENSMUST00000163064 1700028K03Rik-003 processed_transcript Mus_musculus 1.99965e-42 178
ENSMUST00000160160 1700028K03Rik-002 protein_coding Mus_musculus 1.99965e-42 178

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