C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: aspartate-beta-hydroxylase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000078139 Asph-001 ENSMUSG00000028207 10090 - 4:9449079-9669162 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000078139
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000078139 5.831±2.01 3.553±0.41 5.152±0.20 3.572±0.82 3.105±0.72 2.065±0.17 7.975±0.36 1.085±0.00 1.119±0.22 3.181±1.11 3.394±1.29 1.450±0.49 0.457±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003FX CIL_0003FX_0002 CGP 4:8690406-9451691
CIL_0003GG CIL_0003GG_0002 CGP 4:9269293-9669344

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004597 ISS peptide-aspartate beta-dioxygenase activity
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005783 IEA endoplasmic reticulum
GO:0005886 IEA plasma membrane
GO:0007389 IMP pattern specification process
GO:0008285 IGI negative regulation of cell proliferation
GO:0010524 IEA positive regulation of calcium ion transport into cytosol
GO:0016021 ISS integral component of membrane
GO:0030176 IEA integral component of endoplasmic reticulum membrane
GO:0031585 IEA regulation of inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity
GO:0031647 IDA regulation of protein stability
GO:0032237 IEA activation of store-operated calcium channel activity
GO:0032541 IEA cortical endoplasmic reticulum
GO:0033198 IEA response to ATP
GO:0035108 IMP limb morphogenesis
GO:0042264 IDA peptidyl-aspartic acid hydroxylation
GO:0045862 IEA positive regulation of proteolysis
GO:0045893 IEA positive regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding
GO:0055114 IEA oxidation-reduction process
GO:0060021 IMP palate development
GO:0060325 IMP face morphogenesis
GO:0070588 IEA calcium ion transmembrane transport
GO:0071277 IEA cellular response to calcium ion
GO:0090316 IEA positive regulation of intracellular protein transport
GO:0097202 IEA activation of cysteine-type endopeptidase activity
GO:1901879 IDA regulation of protein depolymerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000325897 CLVS1-001 protein_coding Homo_sapiens 4e-37 161
ENST00000356457 ASPH-001 protein_coding Homo_sapiens 0 436
ENST00000379449 ASPH-006 protein_coding Homo_sapiens 1e-24 119
ENST00000379454 ASPH-002 protein_coding Homo_sapiens 0 1690
ENST00000389204 ASPH-005 protein_coding Homo_sapiens 1e-22 111
ENST00000445642 ASPH-201 protein_coding Homo_sapiens 0 398
ENST00000517661 ASPH-015 protein_coding Homo_sapiens 5e-25 119
ENST00000517847 ASPH-032 protein_coding Homo_sapiens 0 250
ENST00000517856 ASPH-018 protein_coding Homo_sapiens 0 300
ENST00000517903 ASPH-003 protein_coding Homo_sapiens 0 259
ENST00000517928 ASPH-013 processed_transcript Homo_sapiens 0 259
ENST00000518068 ASPH-008 protein_coding Homo_sapiens 0 396
ENST00000518306 ASPH-016 protein_coding Homo_sapiens 0 351
ENST00000518592 CLVS1-004 protein_coding Homo_sapiens 3e-37 161
ENST00000518858 CLVS1-006 processed_transcript Homo_sapiens 3e-37 161
ENST00000519234 ASPH-011 protein_coding Homo_sapiens 0 259
ENST00000519846 CLVS1-003 protein_coding Homo_sapiens 4e-37 161
ENST00000520712 CLVS1-007 protein_coding Homo_sapiens 0.0000000004 69
ENST00000521909 ASPH-025 retained_intron Homo_sapiens 0 414
ENST00000522325 ASPH-014 retained_intron Homo_sapiens 0 257
ENST00000522349 ASPH-024 protein_coding Homo_sapiens 0 254
ENST00000522603 ASPH-004 protein_coding Homo_sapiens 0 254
ENST00000522835 ASPH-009 protein_coding Homo_sapiens 0 209
ENST00000523927 ASPH-029 protein_coding Homo_sapiens 3e-36 156
ENST00000541428 ASPH-202 protein_coding Homo_sapiens 0 1690

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