C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: aspartate beta-hydroxylase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000379454 ASPH-002 ENSG00000198363 9606 - 8:61500556-61714559 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000379454
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000379454 18.520±0.00 8.505±0.00 2.080±0.00 10.659±0.00 79.135±0.00 12.451±3.62 7.322±0.00 7.042±4.13 8.432±0.64 8.503±2.22 9.316±2.29 8.263±3.56 5.755±3.50

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003FX CIL_0003FX_0001 CGP 8:60678778-61501645
CIL_0003GG CIL_0003GG_0001 CGP 8:61057158-61714640

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004597 IEA peptide-aspartate beta-dioxygenase activity
GO:0005198 TAS structural molecule activity
GO:0005509 NAS calcium ion binding
GO:0005513 TAS detection of calcium ion
GO:0005515 IPI:IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005783 IDA endoplasmic reticulum
GO:0005789 NAS endoplasmic reticulum membrane
GO:0005886 IDA plasma membrane
GO:0006936 TAS muscle contraction
GO:0007389 IEA pattern specification process
GO:0008285 IEA negative regulation of cell proliferation
GO:0008307 TAS structural constituent of muscle
GO:0009055 TAS electron carrier activity
GO:0010524 IDA positive regulation of calcium ion transport into cytosol
GO:0010649 TAS regulation of cell communication by electrical coupling
GO:0010880 TAS regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum
GO:0010881 ISS regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion
GO:0014701 TAS junctional sarcoplasmic reticulum membrane
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0018193 IEA peptidyl-amino acid modification
GO:0030176 IDA integral component of endoplasmic reticulum membrane
GO:0031585 IDA regulation of inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity
GO:0031647 IEA regulation of protein stability
GO:0032237 IDA activation of store-operated calcium channel activity
GO:0032541 IDA cortical endoplasmic reticulum
GO:0033017 TAS sarcoplasmic reticulum membrane
GO:0033018 TAS sarcoplasmic reticulum lumen
GO:0033198 IDA response to ATP
GO:0034704 TAS calcium channel complex
GO:0035108 IEA limb morphogenesis
GO:0042264 IEA peptidyl-aspartic acid hydroxylation
GO:0044325 TAS ion channel binding
GO:0045862 IDA positive regulation of proteolysis
GO:0045893 IMP positive regulation of transcription, DNA-templated
GO:0055114 IEA oxidation-reduction process
GO:0060021 IEA palate development
GO:0060314 TAS regulation of ryanodine-sensitive calcium-release channel activity
GO:0060316 TAS positive regulation of ryanodine-sensitive calcium-release channel activity
GO:0060325 IEA face morphogenesis
GO:0070588 IDA calcium ion transmembrane transport
GO:0071277 IDA cellular response to calcium ion
GO:0090316 IDA positive regulation of intracellular protein transport
GO:0097202 IDA activation of cysteine-type endopeptidase activity
GO:1901879 IEA regulation of protein depolymerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000108339 Asph-003 protein_coding Mus_musculus 0 1690
ENSMUST00000108340 Asph-002 protein_coding Mus_musculus 0 1690
ENSMUST00000078139 Asph-001 protein_coding Mus_musculus 0 1690
ENSMUST00000084915 Asph-005 protein_coding Mus_musculus 0 436
ENSMUST00000108337 Asph-006 protein_coding Mus_musculus 0 411
ENSMUST00000108334 Asph-013 protein_coding Mus_musculus 0 392
ENSMUST00000098275 Asph-018 protein_coding Mus_musculus 0 300
ENSMUST00000038564 Asph-007 protein_coding Mus_musculus 0 298
ENSMUST00000151232 Asph-020 processed_transcript Mus_musculus 0 263
ENSMUST00000137375 Asph-012 processed_transcript Mus_musculus 0 255
ENSMUST00000103004 Asph-009 protein_coding Mus_musculus 0 254
ENSMUST00000152526 Asph-011 protein_coding Mus_musculus 0 254
ENSMUST00000108335 Asph-014 protein_coding Mus_musculus 0 254
ENSMUST00000108333 Asph-008 protein_coding Mus_musculus 0 254
ENSMUST00000152058 Asph-019 processed_transcript Mus_musculus 0 215
ENSMUST00000084912 Asph-017 protein_coding Mus_musculus 4e-33 148
ENSMUST00000131605 Asph-015 protein_coding Mus_musculus 4e-23 115
ENSMUST00000146441 Asph-004 protein_coding Mus_musculus 4e-23 115

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