C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: POU domain, class 3, transcription factor 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000078229 Pou3f4-001 ENSMUSG00000056854 10090 + X:110814280-110817207 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000078229
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000078229 0.023±0.01 0.026±0.02 0.046±0.00 5.847±3.47 0.034±0.01 0.023±0.01 0.012±0.00 0.013±0.01 0.012±0.00 0.017±0.00 0.048±0.04 0.015±0.00 0.015±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007L1 CIL_0007L1_0003 UCNEbase X:109845197-110817960
CIL_00087R CIL_00087R_0002 VISTA X:110516983-111118738
CIL_0000KR CIL_0000KR_0002 CGP X:110814280-111123874

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003680 IEA AT DNA binding
GO:0003690 IEA double-stranded DNA binding
GO:0005622 IDA intracellular
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006366 IEA transcription from RNA polymerase II promoter
GO:0007605 IMP sensory perception of sound
GO:0021879 IMP forebrain neuron differentiation
GO:0043565 IDA sequence-specific DNA binding
GO:0048839 IMP inner ear development
GO:0090103 IGI cochlea morphogenesis
GO:2001054 IGI negative regulation of mesenchymal cell apoptotic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000328345 POU3F2-001 protein_coding Homo_sapiens 0 375
ENST00000373200 POU3F4-001 protein_coding Homo_sapiens 0 1700

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