C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0007L1_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
POU3F4 UCNEbase 9606 X:82209054-82740401
GeneTranscriptPositionBiotype
ENSG00000213653 (RPL22P22)
ribosomal protein L22 pseudogene 22
ENST00000395439 (RPL22P22-001) 82506434-82506812 processed_pseudogene
ENSG00000228041 (RP4-581F12.1)
ENST00000448435 (RP4-581F12.1-001) 82497669-82497924 processed_pseudogene
CIL_0007L1_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
POU3F4 UCNEbase 9606 X:82740842-83511960
GeneTranscriptPositionBiotype
ENSG00000196767 (POU3F4)
POU class 3 homeobox 4
ENST00000373200 (POU3F4-001) 83508250-83509767 protein_coding
ENSG00000272294 (RP3-326L13.3)
ENST00000607789 (RP3-326L13.3-001) 83511296-83512127 lincRNA
ENSG00000279437 (RP3-326L13.2)
ENST00000625081 (RP3-326L13.2-001) 83506023-83509214 TEC
CIL_0007L1_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
POU3F4 UCNEbase 10090 X:109845197-110817960
GeneTranscriptPositionBiotype
ENSMUSG00000056854 (Pou3f4)
POU domain, class 3, transcription factor 4
ENSMUST00000078229 (Pou3f4-001) 110814280-110817207 protein_coding
ENSMUSG00000081211 (Gm14886)
predicted gene 14886
ENSMUST00000117208 (Gm14886-001) 110604497-110607125 processed_pseudogene
ENSMUSG00000082853 (Gm7134)
predicted gene 7134
ENSMUST00000122296 (Gm7134-001) 110372753-110375158 processed_pseudogene
ENSMUSG00000083641 (Gm9225)
predicted gene 9225
ENSMUST00000121921 (Gm9225-001) 110539337-110540480 processed_pseudogene
ENSMUSG00000083928 (Gm4991)
predicted gene 4991
ENSMUST00000118899 (Gm4991-001) 109910221-109911772 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007L1_0001ENSG00000213653ENST00000395439ENSG00000228041ENST00000448435CIL_0007L1_0002ENSG00000196767ENST00000373200ENSG00000272294ENST00000607789ENSG00000279437ENST00000625081CIL_0007L1_0003ENSMUSG00000056854ENSMUST00000078229ENSMUSG00000081211ENSMUST00000117208ENSMUSG00000082853ENSMUST00000122296ENSMUSG00000083641ENSMUST00000121921ENSMUSG00000083928ENSMUST00000118899
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007L1_0001ENSG00000213653ENST00000395439ENSG00000228041ENST00000448435CIL_0007L1_0002ENSG00000196767ENST00000373200ENSG00000272294ENST00000607789ENSG00000279437ENST00000625081CIL_0007L1_0003ENSMUSG00000056854ENSMUST00000078229ENSMUSG00000081211ENSMUST00000117208ENSMUSG00000082853ENSMUST00000122296ENSMUSG00000083641ENSMUST00000121921ENSMUSG00000083928ENSMUST00000118899
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000213653 ENST00000395439 0.063±0.00 N/A N/A N/A 0.031±0.00 N/A 0.029±0.00 N/A N/A 0.028±0.00 0.028±0.00 N/A N/A N/A
ENSG00000228041 ENST00000448435 N/A N/A N/A N/A N/A N/A N/A N/A 0.043±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000196767 ENST00000373200 N/A N/A 0.189±0.00 0.203±0.04 N/A 0.234±0.08 0.014±0.00 1.672±0.00 N/A N/A N/A N/A N/A 0.045±0.00
ENSG00000272294 ENST00000607789 N/A N/A N/A 0.671±0.58 N/A 0.620±0.00 N/A 0.926±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000279437 ENST00000625081 N/A N/A N/A 0.016±0.00 N/A 0.016±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000056854 ENSMUST00000078229 0.023±0.01 0.026±0.02 0.046±0.00 5.847±3.47 0.034±0.01 0.023±0.01 N/A 0.012±0.00 0.013±0.01 0.012±0.00 0.017±0.00 0.048±0.04 0.015±0.00 0.015±0.00
ENSMUSG00000081211 ENSMUST00000117208 N/A N/A N/A 0.009±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000082853 ENSMUST00000122296 N/A N/A N/A 0.004±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.168±0.08
ENSMUSG00000083641 ENSMUST00000121921 N/A N/A N/A 0.039±0.00 N/A N/A 0.039±0.00 N/A N/A N/A N/A N/A N/A 0.047±0.00
ENSMUSG00000083928 ENSMUST00000118899 N/A N/A N/A N/A N/A N/A N/A N/A 0.006±0.00 N/A N/A 0.254±0.00 N/A 0.010±0.00

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