C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Yip1 domain family, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000078572 Yipf2-202 ENSMUSG00000032182 10090 - 9:21588709-21592831 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonKidneyLiverLungMuscleOvaryPlacentaENSMUST00000078572
Transcript ID Adipose Adrenal Bladder Breast Colon Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000078572 20.035±2.95 45.828±2.53 16.391±1.78 21.789±2.33 28.780±3.51 18.704±2.46 15.672±4.36 26.754±3.22 13.409±0.00 32.062±11.21 21.964±5.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002S5 CIL_0002S5_0002 CGP 9:21526176-21589487
CIL_0004ZT CIL_0004ZT_0003 CGP 9:21546894-21592831
CIL_0004ZU CIL_0004ZU_0003 CGP 9:21588709-21595970

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000253031 YIPF2-001 protein_coding Homo_sapiens 0 815
ENST00000327064 CARM1-002 protein_coding Homo_sapiens 2e-29 135
ENST00000585858 YIPF2-003 protein_coding Homo_sapiens 0 416
ENST00000586575 YIPF2-012 protein_coding Homo_sapiens 0 713
ENST00000586748 YIPF2-002 protein_coding Homo_sapiens 0 815
ENST00000587943 YIPF2-004 protein_coding Homo_sapiens 0 597
ENST00000588347 YIPF2-006 protein_coding Homo_sapiens 0 584
ENST00000588962 YIPF2-011 retained_intron Homo_sapiens 0 399
ENST00000589971 YIPF2-009 protein_coding Homo_sapiens 0 398
ENST00000590329 YIPF2-007 protein_coding Homo_sapiens 0 263
ENST00000592646 YIPF2-010 protein_coding Homo_sapiens 0 414

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