C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 8973
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000079818 Gm8973-201 ENSMUSG00000064081 10090 + 15:99006056-99006370 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderColonKidneyLiverOvaryPlacentaTestisENSMUST00000079818
Transcript ID Adipose Adrenal Bladder Colon Kidney Liver Ovary Placenta Testis
ENSMUST00000079818 0.353±0.14 0.320±0.09 0.040±0.02 0.267±0.00 0.217±0.00 0.079±0.04 0.549±0.03 0.603±0.57 0.307±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005840 IEA ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000407266 RP3-340B19.5-001 processed_pseudogene Homo_sapiens 1e-36 156
ENST00000423857 CTA-85E5.7-001 processed_pseudogene Homo_sapiens 0 211
ENST00000426026 RPL36P2-001 processed_pseudogene Homo_sapiens 0 224
ENST00000442164 RP11-4M23.7-001 processed_pseudogene Homo_sapiens 0 202
ENST00000449443 RP11-95P9.1-001 processed_pseudogene Homo_sapiens 0 252
ENST00000477971 RP11-630D6.1-001 processed_pseudogene Homo_sapiens 0 222
ENST00000488095 RP1-146I3.1-001 processed_pseudogene Homo_sapiens 0 287

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