C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L36 pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000426026 RPL36P2-001 ENSG00000231302 9606 + 20:50620763-50621077 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalKidneyLungTestisENST00000426026
Transcript ID Adipose Adrenal Kidney Lung Testis
ENST00000426026 0.067±0.00 0.654±0.00 0.154±0.00 0.077±0.00 0.140±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZW CIL_0007ZW_0001 VISTA 20:50090256-50696209
CIL_0007VZ CIL_0007VZ_0001 VISTA 20:50389770-50992625
CIL_0007GS CIL_0007GS_0001 CGP 20:50510321-50691528
CIL_000170 CIL_000170_0001 CGP 20:50586108-50756795

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000183748 Gm5745-001 processed_pseudogene Mus_musculus 0 265
ENSMUST00000080492 Rpl36-201 protein_coding Mus_musculus 0 265
ENSMUST00000118269 Gm13611-001 processed_pseudogene Mus_musculus 0 263
ENSMUST00000121187 Rpl36-ps8-001 processed_pseudogene Mus_musculus 0 259
ENSMUST00000085720 Rpl36-ps3-201 protein_coding Mus_musculus 0 254
ENSMUST00000091097 Gm5614-001 processed_pseudogene Mus_musculus 0 241
ENSMUST00000136893 Rpl36-ps2-001 processed_pseudogene Mus_musculus 0 228
ENSMUST00000079818 Gm8973-201 protein_coding Mus_musculus 0 224
ENSMUST00000117574 Gm7851-001 processed_pseudogene Mus_musculus 7.9874e-44 180
ENSMUST00000117431 Rpl36-ps10-001 processed_pseudogene Mus_musculus 5e-36 154

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