C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: succinate-Coenzyme A ligase, GDP-forming, beta subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000079847 Suclg2-201 ENSMUSG00000061838 10090 - 6:95474134-95718837 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000079847
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000079847 18.295±1.50 32.905±6.22 29.291±6.32 4.464±1.85 17.325±3.71 44.426±4.15 38.665±9.92 95.655±23.82 57.386±21.18 11.254±0.81 19.079±3.51 28.045±9.20 13.333±6.55 3.217±0.89

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001TH CIL_0001TH_0003 CGP 6:95474134-96657198

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004776 IEA succinate-CoA ligase (GDP-forming) activity
GO:0004777 ISA succinate-semialdehyde dehydrogenase (NAD+) activity
GO:0005524 IEA ATP binding
GO:0005525 IEA GTP binding
GO:0005739 IDA mitochondrion
GO:0005886 IEA plasma membrane
GO:0006099 IEA tricarboxylic acid cycle
GO:0006104 IEA succinyl-CoA metabolic process
GO:0006105 IEA succinate metabolic process
GO:0019003 IEA GDP binding
GO:0043234 IEA protein complex
GO:0045244 IEA succinate-CoA ligase complex (GDP-forming)
GO:0046872 IEA metal ion binding
GO:0046982 IEA protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000122222 suclg2-201 protein_coding Danio_rerio 0 638
ENSDART00000087520 suclg2-001 protein_coding Danio_rerio 0 505
ENST00000307227 SUCLG2-001 protein_coding Homo_sapiens 0 1554
ENST00000307241 SUCLG2P2-001 processed_pseudogene Homo_sapiens 0 1417
ENST00000460567 SUCLG2-004 protein_coding Homo_sapiens 0 359
ENST00000492795 SUCLG2-003 protein_coding Homo_sapiens 0 1266
ENST00000493112 SUCLG2-002 protein_coding Homo_sapiens 0 1432
ENST00000514739 SUCLG2P4-001 processed_pseudogene Homo_sapiens 1e-32 145

Loading