C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: erythrocyte protein band 4.1-like 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000080208 Epb4.1l3-201 ENSMUSG00000024044 10090 + 17:69156810-69289985 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000080208
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000080208 0.143±0.00 1.440±0.00 2.208±1.19 16.764±10.34 0.400±0.00 0.940±0.50 2.510±0.33 0.564±0.28 1.833±0.00 0.153±0.04 0.916±0.50 2.293±0.29 2.298±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006L0 CIL_0006L0_0002 CGP 17:68837136-69289985

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002175 IMP protein localization to paranode region of axon
GO:0003779 IEA actin binding
GO:0005200 TAS structural constituent of cytoskeleton
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0005886 IEA plasma membrane
GO:0005911 ISS cell-cell junction
GO:0006915 IEA apoptotic process
GO:0007016 TAS cytoskeletal anchoring at plasma membrane
GO:0008360 IMP regulation of cell shape
GO:0019898 IEA extrinsic component of membrane
GO:0030673 IDA axolemma
GO:0030865 TAS cortical cytoskeleton organization
GO:0030866 IEA cortical actin cytoskeleton organization
GO:0030913 IMP paranodal junction assembly
GO:0033270 IDA paranode region of axon
GO:0043217 IMP myelin maintenance
GO:0044224 IDA juxtaparanode region of axon
GO:0048812 IMP neuron projection morphogenesis
GO:0071205 IMP protein localization to juxtaparanode region of axon
GO:0072659 IMP protein localization to plasma membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000004431 epb41l3b-201 protein_coding Danio_rerio 0 217
ENST00000341928 EPB41L3-001 protein_coding Homo_sapiens 0 1472
ENST00000342933 EPB41L3-201 protein_coding Homo_sapiens 0 3199
ENST00000343067 EPB41-201 protein_coding Homo_sapiens 2e-31 143
ENST00000347529 EPB41-005 protein_coding Homo_sapiens 1e-31 143
ENST00000349460 EPB41-004 protein_coding Homo_sapiens 1e-31 143
ENST00000356093 EPB41-202 protein_coding Homo_sapiens 2e-31 143
ENST00000373798 EPB41-001 protein_coding Homo_sapiens 2e-31 143
ENST00000373800 EPB41-003 protein_coding Homo_sapiens 5e-25 121
ENST00000400111 EPB41L3-202 protein_coding Homo_sapiens 0 1744
ENST00000460378 EPB41-006 processed_transcript Homo_sapiens 2e-31 143
ENST00000540638 EPB41L3-004 protein_coding Homo_sapiens 0 1783
ENST00000542652 EPB41L3-034 processed_transcript Homo_sapiens 0 1186
ENST00000544123 EPB41L3-203 protein_coding Homo_sapiens 0 2455
ENST00000545076 EPB41L3-002 processed_transcript Homo_sapiens 0 1652
ENST00000578196 EPB41L3-030 processed_transcript Homo_sapiens 0 215
ENST00000578395 EPB41L3-028 processed_transcript Homo_sapiens 0 322
ENST00000578503 EPB41L3-009 protein_coding Homo_sapiens 0 364
ENST00000578524 EPB41L3-023 processed_transcript Homo_sapiens 0 464
ENST00000578618 EPB41L3-003 retained_intron Homo_sapiens 1.4013e-45 189
ENST00000579271 EPB41L3-024 processed_transcript Homo_sapiens 0 206
ENST00000580179 EPB41L3-033 protein_coding Homo_sapiens 6e-32 141
ENST00000580316 EPB41L3-025 processed_transcript Homo_sapiens 0 662
ENST00000580647 EPB41L3-022 processed_transcript Homo_sapiens 0 204
ENST00000580989 EPB41L3-011 protein_coding Homo_sapiens 0 257
ENST00000581292 EPB41L3-020 processed_transcript Homo_sapiens 0 206
ENST00000581387 EPB41L3-021 processed_transcript Homo_sapiens 0 215
ENST00000581661 EPB41L3-027 processed_transcript Homo_sapiens 0 191
ENST00000581757 EPB41L3-029 processed_transcript Homo_sapiens 0 340
ENST00000582729 EPB41L3-026 processed_transcript Homo_sapiens 0 327
ENST00000584055 EPB41L3-031 retained_intron Homo_sapiens 0 206
ENST00000584670 EPB41L3-019 protein_coding Homo_sapiens 0 547

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