C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chondroitin sulfate synthase 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000080721 Chsy3-201 ENSMUSG00000058152 10090 + 18:59175401-59410446 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000080721
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000080721 0.306±0.07 0.372±0.07 0.369±0.17 0.842±0.29 0.732±0.57 1.301±0.17 0.163±0.03 0.255±0.08 1.121±0.68 1.341±0.64 0.039±0.02 0.899±0.50 1.759±0.86 0.110±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006CU CIL_0006CU_0003 CGP 18:59062248-59410446

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0008152 IEA metabolic process
GO:0016021 IEA integral component of membrane
GO:0032580 IEA Golgi cisterna membrane
GO:0046872 IEA metal ion binding
GO:0047238 IEA glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity
GO:0050510 IEA N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000254190 CHSY1-001 protein_coding Homo_sapiens 0 542
ENST00000305031 CHSY3-001 protein_coding Homo_sapiens 0 3007

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