C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DENN/MADD domain containing 4C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000082026 Dennd4c-001 ENSMUSG00000038024 10090 + 4:86748555-86850603 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000082026
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000082026 7.213±3.59 3.991±0.69 6.925±0.07 2.272±0.83 5.021±0.52 8.432±0.29 2.562±0.75 3.217±0.31 2.494±0.52 6.206±0.76 1.800±0.57 6.106±2.29 5.161±3.33 2.999±0.46

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007DE CIL_0007DE_0002 CGP 4:86648386-86850603
CIL_0007DD CIL_0007DD_0002 CGP 4:86748555-86857412

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005829 IDA cytosol
GO:0005886 IDA plasma membrane
GO:0015031 IEA protein transport
GO:0017112 IDA Rab guanyl-nucleotide exchange factor activity
GO:0030904 IDA retromer complex
GO:0032593 IDA insulin-responsive compartment
GO:0032851 IDA positive regulation of Rab GTPase activity
GO:0032869 IMP cellular response to insulin stimulus
GO:0072659 IMP protein localization to plasma membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000361024 DENND4C-003 protein_coding Homo_sapiens 0 2194
ENST00000380424 DENND4C-004 protein_coding Homo_sapiens 0 968
ENST00000380427 DENND4C-002 protein_coding Homo_sapiens 0 2540
ENST00000380437 DENND4C-008 retained_intron Homo_sapiens 0 2852
ENST00000434457 DENND4C-006 protein_coding Homo_sapiens 0 6455
ENST00000494124 DENND4C-009 nonsense_mediated_decay Homo_sapiens 0 2852
ENST00000602442 DENND4C-010 retained_intron Homo_sapiens 0 267
ENST00000602925 DENND4C-005 protein_coding Homo_sapiens 0 3402

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