C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 42
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000084733 Tmem42-201 ENSMUSG00000066233 10090 + 9:123021326-123023490 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000084733
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000084733 9.345±0.48 60.985±29.43 9.259±1.25 5.693±2.38 9.081±3.83 9.518±2.65 7.337±2.02 11.701±1.01 7.456±3.92 13.548±6.35 7.757±0.67 17.874±10.13 4.411±2.45 3.386±1.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006YZ CIL_0006YZ_0002 CGP 9:122951081-123023490
CIL_000741 CIL_000741_0002 CGP 9:123021326-123067561

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000302392 TMEM42-001 protein_coding Homo_sapiens 0 470
ENST00000477126 TMEM42-002 retained_intron Homo_sapiens 0 305

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