C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 42
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000477126 TMEM42-002 ENSG00000169964 9606 + 3:44861904-44865670 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000477126
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000477126 0.360±0.00 0.446±0.00 0.092±0.00 0.572±0.16 0.382±0.02 0.586±0.30 0.144±0.06 0.355±0.23 0.208±0.12 0.296±0.00 0.251±0.12 0.730±0.12 0.282±0.08 1.411±0.78

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006YD CIL_0006YD_0001 CGP 3:44737661-44873376
CIL_0006YZ CIL_0006YZ_0001 CGP 3:44761717-44873376
CIL_000741 CIL_000741_0001 CGP 3:44861869-44914990

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000084733 Tmem42-201 protein_coding Mus_musculus 0 305

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