C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 42
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000302392 TMEM42-001 ENSG00000169964 9606 + 3:44861869-44865670 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000302392
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000302392 6.217±0.00 5.064±0.00 0.083±0.00 5.628±4.30 5.474±4.41 3.050±2.14 2.127±1.76 6.029±3.90 1.693±0.81 6.726±0.00 3.365±1.63 8.346±3.16 6.258±0.65 13.183±1.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006YD CIL_0006YD_0001 CGP 3:44737661-44873376
CIL_0006YZ CIL_0006YZ_0001 CGP 3:44761717-44873376
CIL_000741 CIL_000741_0001 CGP 3:44861869-44914990

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000084733 Tmem42-201 protein_coding Mus_musculus 0 470

Loading