C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: HIV-1 tat interactive protein 2, homolog (human)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000085272 Htatip2-201 ENSMUSG00000039745 10090 + 7:49759106-49773999 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000085272
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000085272 3.230±1.96 7.466±3.93 10.563±2.17 1.716±1.62 1.646±0.36 3.520±2.47 0.902±0.13 3.801±1.40 9.085±4.58 3.329±2.84 1.565±1.23 5.770±5.19 11.765±6.32 2.621±0.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004AP CIL_0004AP_0003 CGP 7:49631499-49773999
CIL_0004AQ CIL_0004AQ_0003 CGP 7:49759106-49858265

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001525 IEA angiogenesis
GO:0005515 IEA protein binding
GO:0005635 ISS nuclear envelope
GO:0005737 ISS cytoplasm
GO:0006915 IEA apoptotic process
GO:0016020 IEA membrane
GO:0016491 IEA oxidoreductase activity
GO:0030154 IEA cell differentiation
GO:0045765 ISS regulation of angiogenesis
GO:0051170 ISS nuclear import
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000419348 HTATIP2-001 protein_coding Homo_sapiens 0 813
ENST00000421577 HTATIP2-004 protein_coding Homo_sapiens 0 804
ENST00000443524 HTATIP2-003 protein_coding Homo_sapiens 0 806
ENST00000451739 HTATIP2-002 protein_coding Homo_sapiens 0 822
ENST00000530266 HTATIP2-006 protein_coding Homo_sapiens 0 407
ENST00000531058 HTATIP2-009 protein_coding Homo_sapiens 0 424
ENST00000532081 HTATIP2-007 protein_coding Homo_sapiens 0 425
ENST00000532505 HTATIP2-005 protein_coding Homo_sapiens 0 416
ENST00000533914 HTATIP2-008 retained_intron Homo_sapiens 0 403

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