C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SR-related CTD-associated factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000085383 Scaf1-001 ENSMUSG00000038406 10090 - 7:45002948-45016363 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000085383
Transcript ID Adipose Bladder Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000085383 3.268±0.37 4.195±0.00 1.552±0.00 1.474±0.00 2.392±0.45 3.128±0.00 2.113±0.19 9.425±0.00 8.472±5.95 2.761±0.38

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0005634 IEA nucleus
GO:0006366 IEA transcription from RNA polymerase II promoter
GO:0006397 IEA mRNA processing
GO:0008380 IEA RNA splicing
GO:0019904 IEA protein domain specific binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000360565 SCAF1-001 protein_coding Homo_sapiens 0 1869
ENST00000622360 SCAF1-201 protein_coding Homo_sapiens 0 1869

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