C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SR-related CTD-associated factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000622360 SCAF1-201 ENSG00000126461 9606 + 19:49645020-49658641 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000622360
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000622360 36.367±0.00 21.585±0.00 1.291±0.00 22.609±20.51 30.749±0.00 22.948±0.00 6.502±6.06 10.493±9.42 9.565±0.00 17.232±0.00 18.795±16.89 41.968±25.02 17.733±10.58 27.702±21.23

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000085383 Scaf1-001 protein_coding Mus_musculus 0 1869
ENSMUST00000117282 Scaf1-003 protein_coding Mus_musculus 0 1869
ENSMUST00000148227 Scaf1-004 retained_intron Mus_musculus 0 1869
ENSDART00000113219 TNRC6A-201 protein_coding Danio_rerio 0.00001 58

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