C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: left-right determination factor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000616737 LEFTY2-202 ENSG00000143768 9606 - 1:225936628-225941173 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000616737
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000616737 0.347±0.00 0.028±0.00 0.432±0.04 0.284±0.25 0.151±0.11 0.787±0.00 0.044±0.00 0.980±0.81 0.051±0.00 31.542±24.41 4.849±2.35 2.159±1.64

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007R5 CIL_0007R5_0001 VISTA 1:225466688-226068183
CIL_0005S0 CIL_0005S0_0001 CGP 1:225919877-225941489

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005160 IEA transforming growth factor beta receptor binding
GO:0008083 IEA growth factor activity
GO:0016049 IEA cell growth
GO:0040007 IEA growth

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000037361 Lefty1-001 protein_coding Mus_musculus 0 1013
ENSMUST00000085797 Lefty2-001 protein_coding Mus_musculus 0 1013
ENSMUST00000132087 Lefty1-002 retained_intron Mus_musculus 0 440
ENSMUST00000155546 Lefty2-002 retained_intron Mus_musculus 0 294

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