C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007W4_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1645 VISTA 9606 22:28050709-28652407
GeneTranscriptPositionBiotype
ENSG00000239249 (RN7SL757P)
RNA, 7SL, cytoplasmic 757, pseudogene 		ENST00000466709 (RN7SL757P-201) 28056153-28056453 misc_RNA
ENSG00000266503 (RN7SL162P)
RNA, 7SL, cytoplasmic 162, pseudogene 		ENST00000579233 (RN7SL162P-201) 28642979-28643270 misc_RNA
ENSG00000279802 (CTA-544A11.1)
 ENST00000624411 (CTA-544A11.1-001) 28220486-28232600 antisense
ENSG00000280258 (CTA-732E4.1)
 ENST00000624817 (CTA-732E4.1-001) 28398572-28404581 antisense
CIL_0007W4_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1645 VISTA 10090 5:110754482-111355796
GeneTranscriptPositionBiotype
ENSMUSG00000029505 (Ep400)
E1A binding protein p400 		ENSMUST00000041558 (Ep400-002) 110664373-110770527 protein_coding
ENSMUST00000112433 (Ep400-003) 110738070-110770155 protein_coding
ENSMUST00000112435 (Ep400-201) 110664373-110770717 protein_coding
ENSMUST00000112436 (Ep400-001) 110664378-110770717 protein_coding
ENSMUST00000122901 (Ep400-009) 110667534-110668807 retained_intron
ENSMUST00000125325 (Ep400-006) 110697341-110707943 protein_coding
ENSMUST00000129884 (Ep400-008) 110687874-110692167 retained_intron
ENSMUST00000141986 (Ep400-007) 110695962-110699133 retained_intron
ENSMUST00000144581 (Ep400-010) 110667370-110668188 processed_transcript
ENSMUST00000146458 (Ep400-004) 110737672-110770585 protein_coding
ENSMUST00000146652 (Ep400-005) 110756432-110770717 processed_transcript
ENSMUSG00000029507 (Pus1)
pseudouridine synthase 1 		ENSMUST00000031481 (Pus1-003) 110773667-110780659 protein_coding
ENSMUST00000031483 (Pus1-001) 110773667-110780596 protein_coding
ENSMUST00000086643 (Pus1-002) 110773667-110780596 protein_coding
ENSMUST00000112426 (Pus1-004) 110773667-110779967 protein_coding
ENSMUST00000136483 (Pus1-005) 110775536-110780146 protein_coding
ENSMUST00000149208 (Pus1-006) 110775545-110780591 protein_coding
ENSMUST00000170468 (Pus1-201) 110773668-110780615 protein_coding
ENSMUSG00000029512 (Ulk1)
unc-51 like kinase 1 		ENSMUST00000031490 (Ulk1-201) 110784488-110810097 protein_coding
ENSMUSG00000029521 (Chek2)
checkpoint kinase 2 		ENSMUST00000066160 (Chek2-201) 110840017-110874133 protein_coding
ENSMUSG00000043510 (Hscb)
HscB iron-sulfur cluster co-chaperone homolog (E. coli) 		ENSMUST00000056937 (Hscb-001) 110829070-110839777 protein_coding
ENSMUST00000122921 (Hscb-002) 110829081-110834895 retained_intron
ENSMUST00000144850 (Hscb-003) 110829080-110836320 nonsense_mediated_decay
ENSMUST00000145318 (Hscb-004) 110829080-110839575 protein_coding
ENSMUSG00000050017 (Pitpnb)
phosphatidylinositol transfer protein, beta 		ENSMUST00000086635 (Pitpnb-201) 111330763-111388359 protein_coding
ENSMUSG00000081104 (Gm15989)
predicted gene 15989 		ENSMUST00000121895 (Gm15989-001) 110905244-110905741 processed_pseudogene
ENSMUSG00000083771 (Gm15988)
predicted gene 15988 		ENSMUST00000118677 (Gm15988-001) 111008480-111008846 processed_pseudogene
ENSMUSG00000086401 (Gm15559)
predicted gene 15559 		ENSMUST00000132267 (Gm15559-001) 110770949-110779260 processed_transcript
ENSMUSG00000096238 (Gm22583)
predicted gene, 22583 		ENSMUST00000178031 (Gm22583-201) 110757085-110757191 snRNA
ENSMUSG00000097152 (Gm26515)
predicted gene, 26515 		ENSMUST00000181141 (Gm26515-201) 110779882-110781127 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007W4_0001ENSG00000239249ENST00000466709ENSG00000266503ENST00000579233ENSG00000279802ENST00000624411ENSG00000280258ENST00000624817CIL_0007W4_0002ENSMUSG00000029505ENSMUST00000041558ENSMUST00000112433ENSMUST00000112435ENSMUST00000112436ENSMUST00000122901ENSMUST00000125325ENSMUST00000129884ENSMUST00000141986ENSMUST00000144581ENSMUST00000146458ENSMUST00000146652ENSMUSG00000029507ENSMUST00000031481ENSMUST00000031483ENSMUST00000086643ENSMUST00000112426ENSMUST00000136483ENSMUST00000149208ENSMUST00000170468ENSMUSG00000029512ENSMUST00000031490ENSMUSG00000029521ENSMUST00000066160ENSMUSG00000043510ENSMUST00000056937ENSMUST00000122921ENSMUST00000144850ENSMUST00000145318ENSMUSG00000050017ENSMUST00000086635ENSMUSG00000081104ENSMUST00000121895ENSMUSG00000083771ENSMUST00000118677ENSMUSG00000086401ENSMUST00000132267ENSMUSG00000096238ENSMUST00000178031ENSMUSG00000097152ENSMUST00000181141
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007W4_0001ENSG00000239249ENST00000466709ENSG00000266503ENST00000579233ENSG00000279802ENST00000624411ENSG00000280258ENST00000624817CIL_0007W4_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
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000239249 ENST00000466709 N/A 0.066±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.132±0.00
ENSG00000266503 ENST00000579233 N/A 0.307±0.00 N/A 0.200±0.00 0.127±0.00 0.231±0.00 N/A 0.252±0.00 0.171±0.00 0.122±0.00 N/A 1.194±0.00 N/A 0.113±0.00
ENSG00000279802 ENST00000624411 0.069±0.00 0.160±0.00 0.325±0.00 0.061±0.03 0.208±0.09 0.166±0.12 0.098±0.05 0.099±0.01 0.221±0.17 0.351±0.31 0.093±0.07 0.089±0.11 0.005±0.00 0.068±0.02
ENSG00000280258 ENST00000624817 0.022±0.00 0.173±0.00 0.934±0.00 0.048±0.01 0.082±0.00 0.225±0.20 0.153±0.11 0.077±0.05 0.531±0.51 0.667±0.66 0.001±0.00 0.232±0.27 0.064±0.05 0.277±0.25
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029505 ENSMUST00000041558 N/A 4.609±1.13 N/A 3.786±0.87 2.258±0.00 2.716±0.00 0.792±0.17 1.628±0.00 1.371±0.56 N/A 0.548±0.14 6.565±3.48 2.109±0.52 14.198±3.50
ENSMUST00000112433 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 44.774±19.74
ENSMUST00000112435 1.196±0.45 3.133±0.82 N/A 4.448±2.64 1.117±0.00 N/A 0.560±0.13 1.450±0.45 1.197±0.83 2.997±0.73 N/A 3.856±1.71 1.144±0.00 8.004±0.60
ENSMUST00000112436 2.393±1.33 4.441±2.03 2.137±0.68 2.762±0.84 3.857±1.85 2.814±0.39 1.036±0.23 1.967±0.55 2.017±0.91 3.688±0.00 0.698±0.19 3.267±1.31 3.836±1.71 N/A
ENSMUST00000122901 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125325 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129884 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141986 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144581 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146458 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146652 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000029507 ENSMUST00000031481 N/A N/A N/A N/A N/A 2.677±0.90 N/A N/A 1.467±0.37 N/A 1.962±0.00 N/A N/A N/A
ENSMUST00000031483 5.079±1.54 9.084±2.21 3.911±0.77 2.907±0.80 3.746±1.33 4.117±0.86 1.973±0.50 7.271±1.48 5.463±3.06 3.340±0.57 2.004±1.51 8.387±1.14 6.008±1.32 2.018±0.54
ENSMUST00000086643 N/A 3.621±0.00 N/A N/A 1.460±0.00 1.540±0.00 N/A N/A N/A N/A 0.660±0.09 2.685±0.25 N/A N/A
ENSMUST00000112426 3.162±0.63 N/A 1.842±0.00 3.121±1.80 1.961±0.00 3.216±0.32 2.757±0.86 3.946±0.70 2.374±0.00 N/A 1.251±0.21 4.667±1.47 4.341±1.24 N/A
ENSMUST00000136483 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149208 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170468 9.643±3.23 4.899±1.92 6.197±1.99 2.659±0.59 6.903±1.68 4.128±1.30 2.633±0.57 8.427±1.26 10.087±6.39 3.067±1.90 1.708±0.66 8.257±4.56 12.365±6.55 1.483±0.20
ENSMUSG00000029512 ENSMUST00000031490 9.146±1.85 18.287±3.40 8.417±0.91 16.892±2.48 11.094±5.71 11.738±1.69 15.337±4.11 10.264±1.37 9.802±1.95 15.654±0.51 18.945±1.74 13.507±2.86 10.825±5.87 2.887±1.36
ENSMUSG00000029521 ENSMUST00000066160 2.999±0.50 3.407±1.35 2.365±0.40 1.500±0.96 2.556±0.79 3.887±1.98 0.746±0.27 1.549±0.69 6.801±6.90 1.649±0.77 0.418±0.19 4.175±1.51 2.267±1.65 0.582±0.25
ENSMUSG00000043510 ENSMUST00000056937 6.790±0.54 5.557±0.50 13.010±0.49 2.092±0.95 6.651±2.91 6.659±3.53 4.909±1.92 11.759±1.34 11.209±10.28 7.078±1.48 5.919±0.99 7.836±2.80 7.392±3.68 4.475±1.92
ENSMUST00000122921 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144850 N/A N/A N/A 4.664±0.00 N/A N/A N/A N/A N/A N/A 1.109±0.00 8.756±1.84 11.366±5.44 4.565±0.00
ENSMUST00000145318 N/A N/A N/A 2.215±0.00 N/A N/A N/A N/A N/A N/A N/A 4.901±0.00 4.050±0.76 1.994±0.00
ENSMUSG00000050017 ENSMUST00000086635 13.601±2.05 13.790±12.64 26.470±0.81 21.228±3.66 7.225±2.72 15.405±5.62 5.003±2.63 7.254±2.23 17.834±4.98 16.344±4.76 4.435±0.78 21.009±10.20 28.110±7.98 10.552±3.94
ENSMUSG00000081104 ENSMUST00000121895 0.299±0.00 N/A 0.244±0.16 0.611±0.41 N/A 0.457±0.00 0.100±0.00 N/A 0.119±0.10 0.149±0.02 0.099±0.00 0.501±0.22 0.154±0.00 1.074±1.44
ENSMUSG00000083771 ENSMUST00000118677 0.370±0.00 0.439±0.00 N/A N/A 1.850±1.65 0.557±0.19 0.310±0.15 0.204±0.10 0.086±0.04 0.412±0.14 N/A 0.642±0.46 N/A 0.175±0.00
ENSMUSG00000086401 ENSMUST00000132267 N/A N/A N/A 0.968±0.12 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.401±0.77
ENSMUSG00000096238 ENSMUST00000178031 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 33.549±0.00 N/A
ENSMUSG00000097152 ENSMUST00000181141 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.911±0.00

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