C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: prolactin regulatory element binding
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000088063 Preb-002 ENSMUSG00000045302 10090 - 5:30955043-30960280 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000088063
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000088063 30.324±1.91 34.155±3.38 25.424±3.41 17.347±5.67 25.234±5.16 33.903±2.85 14.764±2.49 40.351±5.25 32.133±7.72 22.991±1.13 14.243±1.37 32.285±8.16 31.423±6.23 8.339±3.11

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 ISS sequence-specific DNA binding transcription factor activity
GO:0006355 ISS regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000260643 PREB-001 protein_coding Homo_sapiens 0 1140
ENST00000406567 PREB-003 protein_coding Homo_sapiens 0 839
ENST00000416802 PREB-011 processed_transcript Homo_sapiens 0 209
ENST00000430533 PREB-010 protein_coding Homo_sapiens 0 460
ENST00000441451 PREB-008 nonsense_mediated_decay Homo_sapiens 3e-23 111
ENST00000444452 PREB-002 nonsense_mediated_decay Homo_sapiens 0 859
ENST00000456259 PREB-009 protein_coding Homo_sapiens 1e-27 128
ENST00000468045 PREB-005 retained_intron Homo_sapiens 0 743
ENST00000474802 PREB-007 retained_intron Homo_sapiens 0 444

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