C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: serine/arginine-rich protein specific kinase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000088392 Srpk2-201 ENSMUSG00000062604 10090 - 5:23503356-23616571 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000088392
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000088392 6.035±0.76 10.829±0.24 23.027±3.95 4.420±0.75 4.210±0.26 3.776±0.44 2.735±0.82 4.861±0.48 4.004±0.72 6.290±2.57 3.390±0.83 29.005±15.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00040Y CIL_00040Y_0002 CGP 5:23434441-23616571
CIL_0005BH CIL_0005BH_0003 CGP 5:23503356-23783711

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000245 IDA spliceosomal complex assembly
GO:0000287 IDA magnesium ion binding
GO:0001525 IDA angiogenesis
GO:0004674 IDA protein serine/threonine kinase activity
GO:0005515 IPI protein binding
GO:0005524 IDA ATP binding
GO:0005634 IDA nucleus
GO:0005730 IEA nucleolus
GO:0005737 IDA cytoplasm
GO:0006468 IDA protein phosphorylation
GO:0008284 IDA positive regulation of cell proliferation
GO:0008380 IDA RNA splicing
GO:0010628 IDA positive regulation of gene expression
GO:0030154 IEA cell differentiation
GO:0035063 IDA nuclear speck organization
GO:0035556 IDA intracellular signal transduction
GO:0043525 IDA positive regulation of neuron apoptotic process
GO:0044822 IEA poly(A) RNA binding
GO:0045070 ISS positive regulation of viral genome replication
GO:0045071 ISS negative regulation of viral genome replication
GO:0045787 IDA positive regulation of cell cycle
GO:0071889 IDA 14-3-3 protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000257745 KMT2E-201 protein_coding Homo_sapiens 0 460
ENST00000311117 KMT2E-001 protein_coding Homo_sapiens 0 462
ENST00000334877 KMT2E-202 protein_coding Homo_sapiens 0 507
ENST00000334884 KMT2E-004 nonsense_mediated_decay Homo_sapiens 0 507
ENST00000357311 SRPK2-001 protein_coding Homo_sapiens 0 3663
ENST00000393651 SRPK2-008 protein_coding Homo_sapiens 0 3321
ENST00000460391 SRPK2-013 protein_coding Homo_sapiens 0 726
ENST00000462282 SRPK2-010 processed_transcript Homo_sapiens 0 204
ENST00000465072 SRPK2-003 nonsense_mediated_decay Homo_sapiens 0 484
ENST00000465112 SRPK2-009 nonsense_mediated_decay Homo_sapiens 0 228
ENST00000466917 SRPK2-004 retained_intron Homo_sapiens 0 2193
ENST00000474770 SRPK2-006 protein_coding Homo_sapiens 0 662
ENST00000476117 SRPK2-012 retained_intron Homo_sapiens 0 728
ENST00000477925 SRPK2-007 protein_coding Homo_sapiens 0 1604
ENST00000482862 SRPK2-015 processed_transcript Homo_sapiens 0 219
ENST00000482897 SRPK2-014 protein_coding Homo_sapiens 0 726
ENST00000485455 SRPK2-011 processed_transcript Homo_sapiens 0 555
ENST00000489828 SRPK2-002 protein_coding Homo_sapiens 0 3121
ENST00000493638 SRPK2-005 processed_transcript Homo_sapiens 3.00018e-42 176
ENST00000523367 NKAIN3-004 processed_transcript Homo_sapiens 0 291
ENST00000523408 SRPK2P-001 processed_pseudogene Homo_sapiens 0 1055
ENST00000603277 RP1-21P18.1-001 processed_pseudogene Homo_sapiens 0 243

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