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C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | ERGIC and golgi 3 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000088650  |
Ergic3-002 |
ENSMUSG00000005881 |
10090 | + |
2:156008106-156018279  |
protein_coding |
|
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Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008EI | CIL_0008EI_0002 | VISTA | 2:155562263-156164147 |
| CIL_0005FV | CIL_0005FV_0002 | CGP | 2:155973279-156018279 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003674 | ND | molecular_function |
| GO:0005783 | IEA | endoplasmic reticulum |
| GO:0005793 | ISS | endoplasmic reticulum-Golgi intermediate compartment |
| GO:0005794 | IEA | Golgi apparatus |
| GO:0006888 | ISS | ER to Golgi vesicle-mediated transport |
| GO:0008150 | ND | biological_process |
| GO:0016021 | IEA | integral component of membrane |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSDART00000123923
|
DHX29-202 | protein_coding | Danio_rerio | 0.000007 | 57 |
|
ENSDART00000129467
|
DHX29-201 | protein_coding | Danio_rerio | 0.000007 | 57 |
|
ENST00000279052
|
ERGIC3-005 | retained_intron | Homo_sapiens | 0 | 544 |
|
ENST00000348547
|
ERGIC3-001 | protein_coding | Homo_sapiens | 0 | 1507 |
|
ENST00000357394
|
ERGIC3-003 | protein_coding | Homo_sapiens | 0 | 1594 |
|
ENST00000411577
|
ERGIC3-011 | protein_coding | Homo_sapiens | 0 | 481 |
|
ENST00000413587
|
ERGIC3-017 | protein_coding | Homo_sapiens | 0 | 835 |
|
ENST00000416206
|
ERGIC3-006 | protein_coding | Homo_sapiens | 0 | 1478 |
|
ENST00000438317
|
ERGIC3-010 | nonsense_mediated_decay | Homo_sapiens | 0 | 549 |
|
ENST00000442139
|
ERGIC3-008 | protein_coding | Homo_sapiens | 0 | 279 |
|
ENST00000447986
|
ERGIC3-004 | retained_intron | Homo_sapiens | 0 | 1011 |
|
ENST00000451605
|
ERGIC3-015 | protein_coding | Homo_sapiens | 0 | 418 |
|
ENST00000461043
|
ERGIC3-012 | retained_intron | Homo_sapiens | 0 | 824 |
|
ENST00000465298
|
ERGIC3-020 | retained_intron | Homo_sapiens | 0 | 368 |
|
ENST00000475211
|
ERGIC3-021 | retained_intron | Homo_sapiens | 1e-24 | 117 |
|
ENST00000482338
|
ERGIC3-014 | processed_transcript | Homo_sapiens | 0 | 505 |
|
ENST00000486268
|
ERGIC3-018 | processed_transcript | Homo_sapiens | 0 | 549 |
|
ENST00000488384
|
ERGIC3-016 | retained_intron | Homo_sapiens | 0 | 348 |
|
ENST00000488935
|
ERGIC3-009 | processed_transcript | Homo_sapiens | 0 | 270 |
|
ENST00000489071
|
ERGIC3-019 | processed_transcript | Homo_sapiens | 0 | 453 |
|
ENST00000496172
|
ERGIC3-013 | retained_intron | Homo_sapiens | 0 | 876 |
