C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ERGIC and golgi 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000496172 ERGIC3-013 ENSG00000125991 9606 + 20:35542443-35556262 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonHeartMuscleTestisENST00000496172
Transcript ID Adipose Brain Colon Heart Muscle Testis
ENST00000496172 22.674±0.00 14.449±0.00 11.861±8.56 3.166±0.00 4.551±0.00 56.083±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008EI CIL_0008EI_0001 VISTA 20:35018152-35620688
CIL_0005FV CIL_0005FV_0001 CGP 20:35523186-35557634

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000006035 Ergic3-001 protein_coding Mus_musculus 0 1018
ENSMUST00000088650 Ergic3-002 protein_coding Mus_musculus 0 876
ENSMUST00000142859 Ergic3-009 protein_coding Mus_musculus 0 859
ENSMUST00000155370 Ergic3-006 protein_coding Mus_musculus 0 712
ENSMUST00000144707 Ergic3-003 retained_intron Mus_musculus 0 616
ENSMUST00000150970 Ergic3-004 processed_transcript Mus_musculus 0 228
ENSDART00000123923 DHX29-202 protein_coding Danio_rerio 0.000004 57
ENSDART00000129467 DHX29-201 protein_coding Danio_rerio 0.000004 57

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