C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005FV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000125975-ENSG00000125991 CGP 9606 20:35523186-35557634
GeneTranscriptPositionBiotype
ENSG00000125975 (C20orf173)
chromosome 20 open reading frame 173 		ENST00000246199 (C20orf173-001) 35526971-35529619 protein_coding
ENST00000374345 (C20orf173-004) 35523186-35529652 protein_coding
ENST00000424444 (C20orf173-002) 35528745-35529623 protein_coding
ENST00000444723 (C20orf173-201) 35526971-35529652 protein_coding
ENSG00000242507 (RP3-477O4.5)
 ENST00000422009 (RP3-477O4.5-002) 35520852-35528255 processed_transcript
ENST00000432650 (RP3-477O4.5-003) 35522236-35523259 processed_transcript
ENST00000450773 (RP3-477O4.5-001) 35521084-35523173 transcribed_unprocessed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0005FV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000074646-ENSMUSG00000005881 CGP 10090 2:155973279-156018279
GeneTranscriptPositionBiotype
ENSMUSG00000005881 (Ergic3)
ERGIC and golgi 3 		ENSMUST00000006035 (Ergic3-001) 156008045-156018279 protein_coding
ENSMUST00000088650 (Ergic3-002) 156008106-156018279 protein_coding
ENSMUST00000130793 (Ergic3-010) 156017215-156018096 processed_transcript
ENSMUST00000137545 (Ergic3-005) 156017546-156018279 retained_intron
ENSMUST00000142859 (Ergic3-009) 156008619-156017638 protein_coding
ENSMUST00000144707 (Ergic3-003) 156008223-156011233 retained_intron
ENSMUST00000149381 (Ergic3-007) 156017648-156018277 retained_intron
ENSMUST00000150970 (Ergic3-004) 156016509-156018150 processed_transcript
ENSMUST00000152568 (Ergic3-008) 156017494-156018279 retained_intron
ENSMUST00000155370 (Ergic3-006) 156010447-156018087 protein_coding
ENSMUSG00000038241 (Cep250)
centrosomal protein 250 		ENSMUST00000039994 (Cep250-201) 155956558-155998900 protein_coding
ENSMUST00000094421 (Cep250-202) 155956558-155998900 protein_coding
ENSMUST00000109618 (Cep250-003) 155956594-155967794 protein_coding
ENSMUST00000109619 (Cep250-001) 155956558-155998900 protein_coding
ENSMUST00000128683 (Cep250-008) 155985915-155990596 nonsense_mediated_decay
ENSMUST00000148191 (Cep250-005) 155976389-155998900 retained_intron
ENSMUST00000149905 (Cep250-004) 155956458-155986613 retained_intron
ENSMUST00000151569 (Cep250-009) 155956572-155974445 protein_coding
ENSMUST00000155160 (Cep250-006) 155979558-155981445 retained_intron
ENSMUST00000156355 (Cep250-007) 155985883-155989603 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005FV_0001ENSG00000125975ENST00000246199ENST00000374345ENST00000424444ENST00000444723ENSG00000242507ENST00000422009ENST00000432650ENST00000450773CIL_0005FV_0002ENSMUSG00000005881ENSMUST00000006035ENSMUST00000088650ENSMUST00000130793ENSMUST00000137545ENSMUST00000142859ENSMUST00000144707ENSMUST00000149381ENSMUST00000150970ENSMUST00000152568ENSMUST00000155370ENSMUSG00000038241ENSMUST00000039994ENSMUST00000094421ENSMUST00000109618ENSMUST00000109619ENSMUST00000128683ENSMUST00000148191ENSMUST00000149905ENSMUST00000151569ENSMUST00000155160ENSMUST00000156355
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005FV_0001ENSG00000125975ENST00000246199ENST00000374345ENST00000424444ENST00000444723ENSG00000242507ENST00000422009CIL_0005FV_0002ENSMUSG00000005881ENSMUST00000006035ENSMUST00000142859ENSMUST00000144707ENSMUST00000150970ENSMUST00000155370ENSMUSG00000038241ENSMUST00000039994ENSMUST00000094421ENSMUST00000109619ENSMUST00000148191
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000125975 ENST00000246199 N/A 0.028±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.091±0.00 N/A 8.993±0.00
ENST00000374345 N/A N/A N/A N/A 0.023±0.00 0.230±0.00 N/A N/A N/A 0.335±0.00 0.107±0.00 N/A N/A 10.727±0.00
ENST00000424444 N/A 0.027±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000444723 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.770±0.00
ENSG00000242507 ENST00000422009 0.012±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000432650 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000450773 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000005881 ENSMUST00000006035 114.122±7.35 105.930±11.21 74.246±16.94 47.101±25.82 66.805±13.51 98.864±4.93 35.195±4.31 124.730±3.59 61.135±9.75 65.686±5.89 20.061±1.18 114.405±24.28 68.915±21.32 136.066±58.46
ENSMUST00000088650 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130793 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137545 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142859 N/A N/A N/A 65.709±27.22 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144707 N/A N/A N/A 86.004±0.00 N/A N/A N/A N/A N/A N/A N/A 198.256±0.00 138.049±17.05 83.017±0.00
ENSMUST00000149381 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150970 N/A N/A N/A N/A 55.222±6.99 75.110±7.94 N/A N/A N/A 55.306±1.23 N/A 133.134±37.31 N/A N/A
ENSMUST00000152568 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155370 N/A N/A N/A N/A 48.336±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000038241 ENSMUST00000039994 1.186±0.00 1.635±0.22 N/A 1.111±0.00 1.181±0.09 0.542±0.09 0.469±0.00 1.111±0.36 0.518±0.06 1.357±0.45 0.373±0.08 2.200±2.22 6.294±0.00 N/A
ENSMUST00000094421 1.132±0.03 N/A 0.714±0.00 10.483±0.00 0.852±0.16 0.644±0.00 0.497±0.18 0.465±0.05 0.728±0.48 0.773±0.00 0.330±0.00 0.793±0.04 1.469±1.05 12.941±0.00
ENSMUST00000109618 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000109619 1.464±0.13 0.876±0.20 1.656±0.22 5.478±1.83 1.632±0.49 1.132±0.33 0.516±0.05 1.190±0.28 1.481±1.08 1.760±0.59 0.670±0.12 3.371±3.59 2.492±0.64 4.460±3.01
ENSMUST00000128683 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148191 2.606±0.00 1.103±0.36 2.351±0.28 3.529±1.32 2.050±0.78 1.575±0.35 0.449±0.11 0.970±0.17 3.989±2.68 1.384±0.40 0.418±0.12 4.020±2.69 3.554±2.87 1.341±0.24
ENSMUST00000149905 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151569 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155160 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156355 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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