C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: rogdi homolog (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000090453 Rogdi-202 ENSMUSG00000022540 10090 - 16:5008755-5013517 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverOvaryPlacentaENSMUST00000090453
Transcript ID Bladder Brain Liver Ovary Placenta
ENSMUST00000090453 6.927±0.80 31.967±19.56 10.327±3.32 12.982±6.40 8.348±2.32

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00004V CIL_00004V_0002 CGP 16:5007288-5013517
CIL_0001G7 CIL_0001G7_0002 CGP 16:5008730-5049910

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0008284 IDA positive regulation of cell proliferation
GO:0030097 IDA hemopoiesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000322048 ROGDI-001 protein_coding Homo_sapiens 0 721
ENST00000585653 ROGDI-013 retained_intron Homo_sapiens 0 584
ENST00000585871 ROGDI-007 retained_intron Homo_sapiens 0 220
ENST00000586153 ROGDI-016 protein_coding Homo_sapiens 0 230
ENST00000586336 ROGDI-008 processed_transcript Homo_sapiens 0 435
ENST00000586504 ROGDI-009 protein_coding Homo_sapiens 0 483
ENST00000587377 ROGDI-003 nonsense_mediated_decay Homo_sapiens 0 649
ENST00000587843 ROGDI-002 nonsense_mediated_decay Homo_sapiens 0 435
ENST00000588201 ROGDI-005 nonsense_mediated_decay Homo_sapiens 0 291
ENST00000589543 ROGDI-011 retained_intron Homo_sapiens 0 603
ENST00000590198 ROGDI-012 retained_intron Homo_sapiens 9.80909e-45 183
ENST00000591292 ROGDI-006 retained_intron Homo_sapiens 0 435
ENST00000591392 ROGDI-015 protein_coding Homo_sapiens 0 601
ENST00000592019 ROGDI-010 protein_coding Homo_sapiens 4e-28 128

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