C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: seryl-tRNA synthetase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000369923 SARS-004 ENSG00000031698 9606 + 1:109213982-109238148 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonENST00000369923
Transcript ID Adrenal Brain Colon
ENST00000369923 12.024±0.00 15.041±0.00 12.635±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098X CIL_00098X_0001 VISTA 1:108953074-109556228
CIL_00099A CIL_00099A_0001 VISTA 1:108974252-109576283

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0004812 IEA aminoacyl-tRNA ligase activity
GO:0004828 IEA serine-tRNA ligase activity
GO:0005524 IEA ATP binding
GO:0005737 IDA:IEA cytoplasm
GO:0006418 IEA tRNA aminoacylation for protein translation
GO:0006434 IEA seryl-tRNA aminoacylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102625 Sars-002 protein_coding Mus_musculus 0 2117
ENSMUST00000090553 Sars-001 protein_coding Mus_musculus 0 1688
ENSMUST00000132467 Sars-004 protein_coding Mus_musculus 0 808
ENSMUST00000153499 Sars-003 protein_coding Mus_musculus 0 616

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