C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein tyrosine phosphatase, receptor type Z, polypeptide 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000090568 Ptprz1-201 ENSMUSG00000068748 10090 + 6:22875502-23052916 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000090568
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000090568 0.156±0.11 0.760±0.36 2.006±0.02 21.654±13.40 0.318±0.13 1.274±0.67 0.232±0.08 0.064±0.02 0.020±0.02 0.665±0.31 0.043±0.02 1.613±1.47 0.023±0.01 0.017±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003R1 CIL_0003R1_0002 CGP 6:22306520-23052916
CIL_0003R2 CIL_0003R2_0002 CGP 6:22875502-23132986

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002244 IMP hematopoietic progenitor cell differentiation
GO:0004725 IMP protein tyrosine phosphatase activity
GO:0005515 IPI protein binding
GO:0005578 IDA proteinaceous extracellular matrix
GO:0005886 IEA plasma membrane
GO:0007409 IDA axonogenesis
GO:0007611 IMP learning or memory
GO:0016021 IEA integral component of membrane
GO:0035335 IMP peptidyl-tyrosine dephosphorylation
GO:0048709 IMP oligodendrocyte differentiation
GO:0070445 IMP regulation of oligodendrocyte progenitor proliferation
GO:0072534 IDA perineuronal net

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000393386 PTPRZ1-001 protein_coding Homo_sapiens 0 7614
ENST00000449182 PTPRZ1-002 protein_coding Homo_sapiens 0 2553
ENST00000470504 PTPRZ1-008 retained_intron Homo_sapiens 0 601
ENST00000471837 PTPRZ1-003 processed_transcript Homo_sapiens 3.00004e-41 172
ENST00000474500 PTPRZ1-010 retained_intron Homo_sapiens 0 706

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