C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: formin-like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000090952 Fmnl2-001 ENSMUSG00000036053 10090 + 2:52857860-53133804 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000090952
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000090952 0.471±0.00 3.267±0.82 9.839±6.36 0.261±0.00 0.496±0.07 0.266±0.05 0.341±0.04 0.336±0.12 0.823±0.22 0.793±0.33 5.552±0.00 1.330±0.85

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007E6 CIL_0007E6_0002 CGP 2:52691664-53134202
CIL_0007E5 CIL_0007E5_0002 CGP 2:52857860-53191284

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005575 ND cellular_component
GO:0005737 IEA cytoplasm
GO:0007010 ISS cytoskeleton organization
GO:0017048 IEA Rho GTPase binding
GO:0022604 ISS regulation of cell morphogenesis
GO:0030866 ISS cortical actin cytoskeleton organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000138015 fmnl2a-002 protein_coding Danio_rerio 0 826
ENSDART00000016814 fmnl2a-001 protein_coding Danio_rerio 0 826
ENSDART00000112883 fmnl2b-201 protein_coding Danio_rerio 0 627
ENST00000288670 FMNL2-001 protein_coding Homo_sapiens 0 4355
ENST00000475377 FMNL2-002 protein_coding Homo_sapiens 0 1814
ENST00000492942 FMNL2-007 retained_intron Homo_sapiens 0 370
ENST00000497192 FMNL2-009 processed_transcript Homo_sapiens 0 429

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