C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin specific peptidase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000091358 Usp1-001 ENSMUSG00000028560 10090 + 4:98923879-98935543 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000091358
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000091358 3.811±2.73 6.862±0.08 2.347±0.00 5.645±2.82 3.480±1.95 4.427±2.18 0.824±0.20 2.174±0.83 5.045±4.64 4.253±0.30 1.370±0.41 9.332±7.84 6.801±1.73 25.889±2.62

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002G2 CIL_0002G2_0002 CGP 4:98923810-99120915

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001501 IMP skeletal system development
GO:0004221 ISS ubiquitin thiolesterase activity
GO:0004843 ISS ubiquitin-specific protease activity
GO:0005634 ISS nucleus
GO:0006281 IEA DNA repair
GO:0006282 ISS regulation of DNA repair
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0009411 ISS response to UV
GO:0016579 ISS protein deubiquitination
GO:0035520 ISS monoubiquitinated protein deubiquitination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000339950 USP1-001 protein_coding Homo_sapiens 0 3452
ENST00000371146 USP1-201 protein_coding Homo_sapiens 0 3386
ENST00000452143 USP1-002 protein_coding Homo_sapiens 0 717

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