C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin specific peptidase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000371146 USP1-201 ENSG00000162607 9606 + 1:62436304-62451802 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartKidneyLiverLungOvaryENST00000371146
Transcript ID Brain Breast Colon Heart Kidney Liver Lung Ovary
ENST00000371146 3.863±0.00 3.783±0.00 3.728±0.00 1.525±0.17 1.003±0.00 1.094±0.71 2.058±1.02 2.088±1.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002G2 CIL_0002G2_0001 CGP 1:62436297-62688368

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004197 TAS cysteine-type endopeptidase activity
GO:0004221 IDA ubiquitin thiolesterase activity
GO:0004843 IDA ubiquitin-specific protease activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0006281 TAS DNA repair
GO:0006282 IDA regulation of DNA repair
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0009411 IDA response to UV
GO:0016579 IDA protein deubiquitination
GO:0035520 IMP monoubiquitinated protein deubiquitination
GO:0036459 IEA ubiquitinyl hydrolase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000091358 Usp1-001 protein_coding Mus_musculus 0 3386
ENSMUST00000030289 Usp1-002 protein_coding Mus_musculus 0 3363
ENSMUST00000125104 Usp1-003 protein_coding Mus_musculus 0 507

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