C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, class II, type 9B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000091790 Atp9b-201 ENSMUSG00000024566 10090 - 18:80734143-80934058 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000091790
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000091790 6.663±1.71 10.128±6.51 8.489±4.42 8.889±2.60 9.817±5.77 6.898±1.29 1.860±0.48 5.243±1.96 4.076±2.15 9.502±1.72 2.402±0.98 10.226±3.62 7.983±4.93 11.810±3.75

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HP CIL_0008HP_0002 VISTA 18:80487642-81088565
CIL_0008IX CIL_0008IX_0002 VISTA 18:80511437-81112175
CIL_0008KF CIL_0008KF_0002 VISTA 18:80518312-81119092

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000287 IEA magnesium ion binding
GO:0004012 IEA phospholipid-translocating ATPase activity
GO:0005524 IEA ATP binding
GO:0005802 IEA trans-Golgi network
GO:0008152 IEA metabolic process
GO:0016021 IEA integral component of membrane
GO:0019829 IEA cation-transporting ATPase activity
GO:0045332 IEA phospholipid translocation
GO:0048471 IEA perinuclear region of cytoplasm
GO:0072600 IEA establishment of protein localization to Golgi
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000307671 ATP9B-004 protein_coding Homo_sapiens 0 3851
ENST00000426216 ATP9B-001 protein_coding Homo_sapiens 0 3701
ENST00000458297 ATP9B-201 protein_coding Homo_sapiens 0 1664
ENST00000490210 ATP9B-008 retained_intron Homo_sapiens 0 2368
ENST00000585674 ATP9B-017 retained_intron Homo_sapiens 0 599
ENST00000586366 ATP9B-003 nonsense_mediated_decay Homo_sapiens 0 1038
ENST00000586672 ATP9B-012 protein_coding Homo_sapiens 0 654
ENST00000586722 ATP9B-006 protein_coding Homo_sapiens 0 736
ENST00000586774 ATP9B-024 retained_intron Homo_sapiens 0 346
ENST00000588895 ATP9B-023 nonsense_mediated_decay Homo_sapiens 0 420
ENST00000588921 ATP9B-010 nonsense_mediated_decay Homo_sapiens 0 250
ENST00000589326 ATP9B-021 protein_coding Homo_sapiens 0 377
ENST00000589732 ATP9B-022 protein_coding Homo_sapiens 0 311
ENST00000589951 ATP9B-025 retained_intron Homo_sapiens 0 459
ENST00000590271 ATP9B-007 retained_intron Homo_sapiens 0 920
ENST00000590477 ATP9B-009 nonsense_mediated_decay Homo_sapiens 0 604
ENST00000590608 ATP9B-015 retained_intron Homo_sapiens 0 233
ENST00000591464 ATP9B-014 processed_transcript Homo_sapiens 0 243

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