C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, class II, type 9B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000307671 ATP9B-004 ENSG00000166377 9606 + 18:79069397-79377491 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000307671
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000307671 2.490±0.00 2.286±0.00 1.784±0.00 4.472±1.59 2.373±1.03 1.910±0.36 0.731±0.02 1.642±0.15 2.950±0.00 1.638±0.56 1.582±0.00 2.559±1.60 1.439±0.40 3.097±0.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007MA CIL_0007MA_0003 UCNEbase 18:78027502-79284092
CIL_0008KF CIL_0008KF_0001 VISTA 18:78942193-79542977
CIL_0008IX CIL_0008IX_0001 VISTA 18:78950009-79550795
CIL_000015 CIL_000015_0002 CGP 18:78980275-79378283
CIL_0008HP CIL_0008HP_0001 VISTA 18:78983189-79584144
CIL_000016 CIL_000016_0002 CGP 18:79069285-79529325

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0000287 IEA magnesium ion binding
GO:0004012 IEA phospholipid-translocating ATPase activity
GO:0005524 IEA ATP binding
GO:0005802 IDA trans-Golgi network
GO:0008152 IEA metabolic process
GO:0015914 IEA phospholipid transport
GO:0016021 IEA integral component of membrane
GO:0019829 IEA cation-transporting ATPase activity
GO:0045332 NAS phospholipid translocation
GO:0046872 IEA metal ion binding
GO:0048471 IDA perinuclear region of cytoplasm
GO:0072600 IMP establishment of protein localization to Golgi
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000091790 Atp9b-201 protein_coding Mus_musculus 0 3851

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