C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, class II, type 9B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000590477 ATP9B-009 ENSG00000166377 9606 + 18:79344328-79378266 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000590477
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000590477 2.110±0.00 2.929±0.00 3.156±0.00 1.644±0.00 0.912±0.00 2.635±0.00 2.208±0.00 3.409±0.00 3.540±0.49 2.249±0.39 3.131±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007MA CIL_0007MA_0003 UCNEbase 18:78027502-79284092
CIL_0008KF CIL_0008KF_0001 VISTA 18:78942193-79542977
CIL_0008IX CIL_0008IX_0001 VISTA 18:78950009-79550795
CIL_000015 CIL_000015_0002 CGP 18:78980275-79378283
CIL_0008HP CIL_0008HP_0001 VISTA 18:78983189-79584144
CIL_000016 CIL_000016_0002 CGP 18:79069285-79529325

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000287 IEA magnesium ion binding
GO:0004012 IEA phospholipid-translocating ATPase activity
GO:0005524 IEA ATP binding
GO:0016021 IEA integral component of membrane
GO:0019829 IEA cation-transporting ATPase activity
GO:0045332 IEA phospholipid translocation
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000091790 Atp9b-201 protein_coding Mus_musculus 0 604

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