C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coiled-coil domain containing 43
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000092569 Ccdc43-001 ENSMUSG00000020925 10090 - 11:102684686-102697782 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000092569
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000092569 0.999±0.09 5.083±0.34 4.543±1.55 0.834±0.28 0.529±0.09 1.190±0.35 0.944±0.42 5.470±1.21 0.796±0.05 23.520±1.18 3.120±2.71 5.160±1.11 0.829±0.53

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ST CIL_0007ST_0002 VISTA 11:102292756-102896210
CIL_0003CO CIL_0003CO_0002 CGP 11:102663716-102697782

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000315286 CCDC43-001 protein_coding Homo_sapiens 0 808
ENST00000457422 CCDC43-003 protein_coding Homo_sapiens 0 333
ENST00000472403 C17orf104-003 nonsense_mediated_decay Homo_sapiens 7e-33 147
ENST00000588210 CCDC43-002 protein_coding Homo_sapiens 0 767
ENST00000588805 C17orf104-007 processed_transcript Homo_sapiens 4e-34 148

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