C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TATA box binding protein (Tbp)-associated factor, RNA polymerase I, C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000093099 Taf1c-001 ENSMUSG00000031832 10090 - 8:119597975-119605222 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000093099
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000093099 3.856±0.33 8.256±2.08 4.339±1.05 6.192±4.12 10.144±1.47 9.842±1.60 1.761±0.59 3.543±0.68 2.837±2.26 5.318±0.70 2.086±0.14 9.433±4.08 5.172±1.69

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004ZQ CIL_0004ZQ_0002 CGP 8:119561979-119598454
CIL_0002AR CIL_0002AR_0002 CGP 8:119575235-119605222
CIL_0002AS CIL_0002AS_0002 CGP 8:119597975-119616926

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000120 TAS RNA polymerase I transcription factor complex
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006360 TAS transcription from RNA polymerase I promoter

Homologs

No Homologs available.

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