C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0002AR_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000154099-ENSG00000103168 | CGP | 9606 | 16:84145287-84187070  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000103168  (TAF1C)TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa |
ENST00000341690 (TAF1C-005)
|
84177852-84187049 | protein_coding | |
|
ENST00000537450 (TAF1C-009)
|
84181496-84186989 | retained_intron | ||
|
ENST00000541676 (TAF1C-201)
|
84177847-84187070 | protein_coding | ||
|
ENST00000544090 (TAF1C-006)
|
84178749-84187039 | retained_intron | ||
|
ENST00000561955 (TAF1C-015)
|
84182267-84187039 | protein_coding | ||
|
ENST00000562330 (TAF1C-018)
|
84182032-84185052 | retained_intron | ||
|
ENST00000562445 (TAF1C-020)
|
84181290-84181758 | retained_intron | ||
|
ENST00000563428 (TAF1C-007)
|
84178781-84187033 | nonsense_mediated_decay | ||
|
ENST00000564208 (TAF1C-004)
|
84177854-84187052 | retained_intron | ||
|
ENST00000564345 (TAF1C-011)
|
84183120-84187063 | protein_coding | ||
|
ENST00000564454 (TAF1C-014)
|
84183267-84187045 | protein_coding | ||
|
ENST00000564774 (TAF1C-008)
|
84177854-84187020 | retained_intron | ||
|
ENST00000565279 (TAF1C-016)
|
84182147-84187038 | retained_intron | ||
|
ENST00000565544 (TAF1C-012)
|
84185158-84187052 | processed_transcript | ||
|
ENST00000566183 (TAF1C-019)
|
84183273-84183751 | retained_intron | ||
|
ENST00000566732 (TAF1C-002)
|
84178712-84187039 | protein_coding | ||
|
ENST00000566903 (TAF1C-010)
|
84177877-84186981 | nonsense_mediated_decay | ||
|
ENST00000567759 (TAF1C-001)
|
84177855-84187011 | protein_coding | ||
|
ENST00000568265 (TAF1C-021)
|
84179122-84181418 | protein_coding | ||
|
ENST00000569505 (TAF1C-017)
|
84182336-84187020 | nonsense_mediated_decay | ||
|
ENST00000569609 (TAF1C-013)
|
84183138-84187045 | nonsense_mediated_decay | ||
|
ENST00000570117 (TAF1C-003)
|
84178848-84187057 | protein_coding | ||
|
ENST00000570270 (TAF1C-022)
|
84181370-84182176 | retained_intron | ||
|
ENSG00000154099 (DNAAF1) dynein, axonemal, assembly factor 1 |
ENST00000378553 (DNAAF1-001)
|
84145317-84177918 | protein_coding | |
|
ENST00000562024 (DNAAF1-010)
|
84175763-84177918 | retained_intron | ||
|
ENST00000563093 (DNAAF1-004)
|
84145310-84174847 | nonsense_mediated_decay | ||
|
ENST00000563818 (DNAAF1-005)
|
84158842-84177917 | processed_transcript | ||
|
ENST00000564928 (DNAAF1-008)
|
84176141-84178767 | protein_coding | ||
|
ENST00000567666 (DNAAF1-007)
|
84159082-84169976 | processed_transcript | ||
|
ENST00000567918 (DNAAF1-003)
|
84145310-84159748 | nonsense_mediated_decay | ||
|
ENST00000569735 (DNAAF1-009)
|
84175933-84177917 | protein_coding | ||
|
ENST00000570298 (DNAAF1-002)
|
84145287-84177918 | retained_intron | ||
|
ENST00000623406 (DNAAF1-006)
|
84175228-84177916 | TEC | ||
| CIL_0002AR_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000031831-ENSMUSG00000031832 | CGP | 10090 | 8:119575235-119605222 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000031831 (Dnaaf1) dynein, axonemal assembly factor 1 |
ENSMUST00000093100 (Dnaaf1-001)
|
119575235-119598454 | protein_coding | |
|
ENSMUSG00000031832 (Taf1c) TATA box binding protein (Tbp)-associated factor, RNA polymerase I, C |
ENSMUST00000093099 (Taf1c-001)
|
119597975-119605222 | protein_coding | |
|
ENSMUST00000126547 (Taf1c-003)
|
119599628-119601578 | processed_transcript | ||
|
ENSMUST00000131652 (Taf1c-005)
|
119598819-119599845 | processed_transcript | ||
|
ENSMUST00000144379 (Taf1c-004)
|
119599387-119600713 | retained_intron | ||
|
ENSMUST00000147964 (Taf1c-002)
|
119597975-119605222 | nonsense_mediated_decay | ||
|
ENSMUSG00000081378 (Rps13-ps4) ribosomal protein S13, pseudogene 4 |
ENSMUST00000117927 (Rps13-ps4-001)
|
119602170-119602625 | processed_pseudogene | |
Expression Patterns
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