C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002AS_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000103168-ENSG00000140955 CGP 9606 16:84177847-84197168
GeneTranscriptPositionBiotype
ENSG00000103168 (TAF1C)
TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa 		ENST00000341690 (TAF1C-005) 84177852-84187049 protein_coding
ENST00000537450 (TAF1C-009) 84181496-84186989 retained_intron
ENST00000541676 (TAF1C-201) 84177847-84187070 protein_coding
ENST00000544090 (TAF1C-006) 84178749-84187039 retained_intron
ENST00000561955 (TAF1C-015) 84182267-84187039 protein_coding
ENST00000562330 (TAF1C-018) 84182032-84185052 retained_intron
ENST00000562445 (TAF1C-020) 84181290-84181758 retained_intron
ENST00000563428 (TAF1C-007) 84178781-84187033 nonsense_mediated_decay
ENST00000564208 (TAF1C-004) 84177854-84187052 retained_intron
ENST00000564345 (TAF1C-011) 84183120-84187063 protein_coding
ENST00000564454 (TAF1C-014) 84183267-84187045 protein_coding
ENST00000564774 (TAF1C-008) 84177854-84187020 retained_intron
ENST00000565279 (TAF1C-016) 84182147-84187038 retained_intron
ENST00000565544 (TAF1C-012) 84185158-84187052 processed_transcript
ENST00000566183 (TAF1C-019) 84183273-84183751 retained_intron
ENST00000566732 (TAF1C-002) 84178712-84187039 protein_coding
ENST00000566903 (TAF1C-010) 84177877-84186981 nonsense_mediated_decay
ENST00000567759 (TAF1C-001) 84177855-84187011 protein_coding
ENST00000568265 (TAF1C-021) 84179122-84181418 protein_coding
ENST00000569505 (TAF1C-017) 84182336-84187020 nonsense_mediated_decay
ENST00000569609 (TAF1C-013) 84183138-84187045 nonsense_mediated_decay
ENST00000570117 (TAF1C-003) 84178848-84187057 protein_coding
ENST00000570270 (TAF1C-022) 84181370-84182176 retained_intron
ENSG00000154099 (DNAAF1)
dynein, axonemal, assembly factor 1 		ENST00000378553 (DNAAF1-001) 84145317-84177918 protein_coding
ENST00000562024 (DNAAF1-010) 84175763-84177918 retained_intron
ENST00000563093 (DNAAF1-004) 84145310-84174847 nonsense_mediated_decay
ENST00000563818 (DNAAF1-005) 84158842-84177917 processed_transcript
ENST00000564928 (DNAAF1-008) 84176141-84178767 protein_coding
ENST00000567666 (DNAAF1-007) 84159082-84169976 processed_transcript
ENST00000567918 (DNAAF1-003) 84145310-84159748 nonsense_mediated_decay
ENST00000569735 (DNAAF1-009) 84175933-84177917 protein_coding
ENST00000570298 (DNAAF1-002) 84145287-84177918 retained_intron
ENST00000623406 (DNAAF1-006) 84175228-84177916 TEC
ENSG00000250685 (RP11-486L19.2)
 ENST00000536986 (RP11-486L19.2-002) 84192558-84197053 antisense
ENST00000561900 (RP11-486L19.2-004) 84194177-84194714 antisense
ENST00000565643 (RP11-486L19.2-001) 84192558-84197053 antisense
ENST00000569834 (RP11-486L19.2-003) 84194934-84197052 antisense
CIL_0002AS_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031832-ENSMUSG00000024266 CGP 10090 8:119597975-119616926
GeneTranscriptPositionBiotype
ENSMUSG00000024266 (Adad2)
adenosine deaminase domain containing 2 		ENSMUST00000098361 (Adad2-201) 119612747-119616926 protein_coding
ENSMUSG00000031831 (Dnaaf1)
dynein, axonemal assembly factor 1 		ENSMUST00000093100 (Dnaaf1-001) 119575235-119598454 protein_coding
ENSMUSG00000031832 (Taf1c)
TATA box binding protein (Tbp)-associated factor, RNA polymerase I, C 		ENSMUST00000093099 (Taf1c-001) 119597975-119605222 protein_coding
ENSMUST00000126547 (Taf1c-003) 119599628-119601578 processed_transcript
ENSMUST00000131652 (Taf1c-005) 119598819-119599845 processed_transcript
ENSMUST00000144379 (Taf1c-004) 119599387-119600713 retained_intron
ENSMUST00000147964 (Taf1c-002) 119597975-119605222 nonsense_mediated_decay
ENSMUSG00000081378 (Rps13-ps4)
ribosomal protein S13, pseudogene 4 		ENSMUST00000117927 (Rps13-ps4-001) 119602170-119602625 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002AS_0001ENSG00000103168ENST00000341690ENST00000537450ENST00000541676ENST00000562330ENST00000563428ENST00000564208ENST00000564345ENST00000564774ENST00000566903ENST00000567759ENST00000568265ENST00000569609ENSG00000154099ENST00000378553ENST00000563093ENST00000570298ENSG00000250685ENST00000536986ENST00000561900ENST00000565643ENST00000569834CIL_0002AS_0002ENSMUSG00000024266ENSMUST00000098361ENSMUSG00000031831ENSMUST00000093100ENSMUSG00000031832ENSMUST00000093099ENSMUST00000147964ENSMUSG00000081378ENSMUST00000117927
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000103168 ENST00000341690 N/A N/A N/A N/A N/A N/A N/A 0.459±0.00 N/A N/A N/A 8.595±0.00 0.983±0.00 N/A
ENST00000537450 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.584±0.00 N/A N/A
ENST00000541676 N/A N/A N/A 0.400±0.00 N/A N/A 1.529±0.00 N/A N/A 3.136±0.00 0.840±0.00 N/A N/A N/A
ENST00000544090 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561955 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562330 N/A N/A N/A N/A N/A N/A N/A N/A 0.365±0.00 N/A N/A N/A N/A N/A
ENST00000562445 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563428 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.664±0.00 N/A
ENST00000564208 2.068±0.00 N/A N/A N/A 4.021±0.00 N/A N/A N/A N/A N/A N/A 3.764±0.00 1.508±0.51 N/A
ENST00000564345 N/A N/A N/A N/A 3.591±0.00 N/A 1.059±0.00 N/A N/A N/A N/A 3.913±0.00 N/A N/A
ENST00000564454 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564774 N/A 9.553±0.00 N/A 2.905±0.00 N/A 1.253±0.99 1.728±0.00 3.140±0.00 0.483±0.00 1.889±1.10 N/A 4.371±3.86 1.249±0.18 N/A
ENST00000565279 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565544 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566183 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566732 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566903 N/A N/A N/A 0.938±0.00 N/A 0.751±0.00 N/A N/A N/A N/A 1.227±0.00 N/A 2.497±0.00 N/A
ENST00000567759 3.388±0.00 N/A N/A 2.147±0.00 N/A N/A 1.194±0.00 4.806±0.00 0.588±0.00 N/A N/A 5.224±0.00 1.439±0.07 N/A
ENST00000568265 N/A N/A N/A N/A 5.760±0.00 N/A N/A 0.500±0.00 0.409±0.00 N/A N/A N/A 3.492±0.00 N/A
ENST00000569505 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569609 N/A N/A N/A N/A N/A 4.883±0.00 N/A N/A N/A N/A 3.012±0.00 N/A N/A N/A
ENST00000570117 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570270 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000154099 ENST00000378553 N/A N/A 0.455±0.00 0.225±0.00 N/A N/A N/A N/A N/A 4.824±0.00 N/A N/A N/A 38.414±14.05
ENST00000562024 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563093 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 28.936±0.00
ENST00000563818 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564928 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567666 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567918 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569735 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570298 N/A N/A N/A 0.126±0.00 N/A N/A N/A N/A N/A 1.690±0.90 N/A 4.018±0.00 N/A 4.685±0.00
ENST00000623406 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000250685 ENST00000536986 N/A N/A N/A N/A 0.087±0.00 N/A 0.062±0.00 N/A N/A N/A N/A N/A N/A 2.553±0.00
ENST00000561900 N/A N/A N/A 0.678±0.00 N/A N/A N/A N/A 0.052±0.00 N/A N/A N/A N/A 28.142±0.00
ENST00000565643 N/A 0.271±0.00 N/A 0.094±0.05 N/A 0.032±0.00 0.064±0.00 0.079±0.00 0.102±0.09 0.056±0.00 N/A 0.164±0.01 0.013±0.00 N/A
ENST00000569834 2.207±0.00 N/A N/A N/A N/A N/A N/A N/A 0.168±0.00 N/A N/A 0.321±0.00 N/A 21.957±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024266 ENSMUST00000098361 0.021±0.00 0.014±0.00 0.005±0.00 0.041±0.01 0.022±0.00 0.046±0.01 0.018±0.01 0.020±0.01 0.007±0.00 0.012±0.00 0.163±0.09 0.620±0.27 0.063±0.02 13.879±5.70
ENSMUSG00000031831 ENSMUST00000093100 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.495±0.16 N/A 3.630±1.07 N/A 307.147±33.12
ENSMUSG00000031832 ENSMUST00000093099 3.856±0.33 8.256±2.08 4.339±1.05 6.192±4.12 10.144±1.47 9.842±1.60 1.761±0.59 3.543±0.68 2.837±2.26 5.318±0.70 2.086±0.14 9.433±4.08 5.172±1.69 N/A
ENSMUST00000126547 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131652 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144379 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147964 1.030±0.05 2.628±0.54 1.466±0.62 1.477±0.30 1.683±0.00 2.098±0.25 0.346±0.04 0.690±0.15 0.839±0.46 1.330±0.18 0.529±0.22 2.720±1.63 1.074±0.28 N/A
ENSMUSG00000081378 ENSMUST00000117927 0.237±0.11 N/A 0.520±0.10 1.346±0.63 0.305±0.16 0.219±0.05 0.113±0.01 0.138±0.04 0.361±0.19 0.111±0.00 0.402±0.00 0.710±0.16 0.469±0.39 0.319±0.12

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