C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: par-6 family cell polarity regulator alpha
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000093195 Pard6a-201 ENSMUSG00000005699 10090 + 8:105701647-105703492 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000093195
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000093195 1.881±0.58 7.384±1.34 1.588±0.27 10.598±2.13 2.979±1.28 2.701±0.99 0.536±0.13 2.814±0.54 0.725±0.26 2.565±0.53 1.364±0.48 2.855±0.77 0.847±0.44 16.326±3.44

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00079G CIL_00079G_0002 CGP 8:105698159-105703493
CIL_00078Z CIL_00078Z_0002 CGP 8:105701154-105707933

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005080 IPI protein kinase C binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005886 IEA plasma membrane
GO:0005923 IDA tight junction
GO:0005938 IDA cell cortex
GO:0007049 IEA cell cycle
GO:0017048 IDA Rho GTPase binding
GO:0030010 TAS establishment of cell polarity
GO:0030054 TAS cell junction
GO:0030742 IPI GTP-dependent protein binding
GO:0043234 IDA protein complex
GO:0045177 IDA apical part of cell
GO:0045217 IDA cell-cell junction maintenance
GO:0051301 IEA cell division

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000219255 PARD6A-001 protein_coding Homo_sapiens 0 1520
ENST00000353265 PARD6G-001 protein_coding Homo_sapiens 0 281
ENST00000458121 PARD6A-002 protein_coding Homo_sapiens 0 1519
ENST00000602551 PARD6A-004 protein_coding Homo_sapiens 0 1064
ENST00000602727 PARD6A-003 retained_intron Homo_sapiens 0 1262

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