C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00079G_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000102977-ENSG00000102981 CGP 9606 16:67657512-67662778
GeneTranscriptPositionBiotype
ENSG00000102981 (PARD6A)
par-6 family cell polarity regulator alpha 		ENST00000219255 (PARD6A-001) 67660959-67662774 protein_coding
ENST00000458121 (PARD6A-002) 67660948-67662778 protein_coding
ENST00000602551 (PARD6A-004) 67660946-67662774 protein_coding
ENST00000602727 (PARD6A-003) 67661232-67662730 retained_intron
ENSG00000159753 (RLTPR)
RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing 		ENST00000334583 (RLTPR-001) 67644919-67657569 protein_coding
ENST00000545661 (RLTPR-002) 67645247-67657518 protein_coding
ENST00000602321 (RLTPR-003) 67647869-67653205 retained_intron
ENST00000602368 (RLTPR-010) 67654518-67657569 nonsense_mediated_decay
ENST00000602467 (RLTPR-005) 67645165-67646247 retained_intron
ENST00000602562 (RLTPR-007) 67648507-67650120 retained_intron
ENST00000602563 (RLTPR-004) 67644988-67647612 nonsense_mediated_decay
ENST00000602633 (RLTPR-008) 67649925-67652008 retained_intron
ENST00000602705 (RLTPR-012) 67656840-67657566 retained_intron
ENST00000602742 (RLTPR-006) 67647447-67648477 retained_intron
ENST00000602924 (RLTPR-013) 67652965-67654461 retained_intron
ENST00000602931 (RLTPR-009) 67651886-67653213 retained_intron
CIL_00079G_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038000-ENSMUSG00000005699 CGP 10090 8:105698159-105703493
GeneTranscriptPositionBiotype
ENSMUSG00000005699 (Pard6a)
par-6 family cell polarity regulator alpha 		ENSMUST00000093195 (Pard6a-201) 105701647-105703492 protein_coding
ENSMUST00000098444 (Pard6a-202) 105701154-105703493 protein_coding
ENSMUSG00000038000 (Acd)
adrenocortical dysplasia 		ENSMUST00000042608 (Acd-201) 105698159-105701095 protein_coding
ENSMUSG00000050357 (Rltpr)
RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing 		ENSMUST00000062574 (Rltpr-201) 105690906-105698178 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00079G_0001ENSG00000102981ENST00000219255ENST00000458121ENST00000602551ENST00000602727ENSG00000159753ENST00000334583ENST00000545661ENST00000602321ENST00000602368ENST00000602467ENST00000602562ENST00000602563ENST00000602633ENST00000602705ENST00000602742ENST00000602924ENST00000602931CIL_00079G_0002ENSMUSG00000005699ENSMUST00000093195ENSMUST00000098444ENSMUSG00000038000ENSMUST00000042608ENSMUSG00000050357ENSMUST00000062574
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00079G_0001ENSG00000102981ENST00000219255ENST00000458121ENST00000602551ENST00000602727ENSG00000159753ENST00000334583ENST00000545661ENST00000602368ENST00000602467ENST00000602562CIL_00079G_0002ENSMUSG00000005699ENSMUST00000093195ENSMUST00000098444ENSMUSG00000038000ENSMUST00000042608ENSMUSG00000050357ENSMUST00000062574
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000102981 ENST00000219255 1.331±0.00 N/A N/A 0.350±0.00 N/A 0.615±0.00 N/A N/A 0.529±0.00 N/A 1.564±0.00 3.540±0.66 1.681±0.12 N/A
ENST00000458121 N/A 2.058±0.00 N/A 7.491±5.01 3.379±0.00 4.097±0.00 1.002±0.00 8.195±0.00 N/A 0.651±0.00 2.769±0.00 3.018±0.19 2.744±0.00 16.437±3.07
ENST00000602551 N/A N/A N/A N/A 0.899±0.00 0.408±0.35 0.166±0.00 0.154±0.00 N/A 1.758±0.00 0.525±0.00 N/A N/A N/A
ENST00000602727 N/A N/A 0.627±0.00 N/A N/A N/A N/A N/A 0.117±0.00 0.392±0.00 N/A 1.250±0.00 N/A N/A
ENSG00000159753 ENST00000334583 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.031±0.00 N/A N/A N/A N/A
ENST00000545661 N/A N/A N/A N/A 0.051±0.00 0.076±0.00 N/A N/A N/A N/A N/A 2.003±0.00 N/A N/A
ENST00000602321 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602368 N/A 26.743±0.00 N/A 13.184±0.00 N/A N/A N/A N/A N/A N/A N/A 0.329±0.00 N/A N/A
ENST00000602467 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.432±0.00 N/A N/A N/A N/A
ENST00000602562 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.353±3.56 N/A N/A
ENST00000602563 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602633 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602705 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602742 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602924 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602931 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000005699 ENSMUST00000093195 1.881±0.58 7.384±1.34 1.588±0.27 10.598±2.13 2.979±1.28 2.701±0.99 0.536±0.13 2.814±0.54 0.725±0.26 2.565±0.53 1.364±0.48 2.855±0.77 0.847±0.44 16.326±3.44
ENSMUST00000098444 5.438±0.80 1.494±0.38 1.897±0.15 3.028±1.26 1.843±0.44 2.088±0.83 1.240±0.21 3.138±0.94 3.017±1.32 2.314±0.81 1.274±0.59 4.082±1.91 1.329±0.61 11.712±0.70
ENSMUSG00000038000 ENSMUST00000042608 15.969±2.18 18.022±3.24 8.950±0.46 21.891±8.24 19.992±6.82 13.198±2.31 5.968±1.40 14.231±1.12 8.980±1.95 14.561±2.09 2.068±0.35 15.783±6.82 9.195±4.81 17.387±6.90
ENSMUSG00000050357 ENSMUST00000062574 N/A N/A N/A 3.903±0.09 4.912±1.31 1.292±0.09 0.525±0.00 0.996±0.01 1.040±0.16 1.519±0.12 1.323±0.00 0.528±0.00 1.059±0.51 N/A

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