C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: par-6 family cell polarity regulator alpha
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000458121 PARD6A-002 ENSG00000102981 9606 + 16:67660948-67662778 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000458121
Transcript ID Adrenal Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000458121 2.058±0.00 7.491±5.01 3.379±0.00 4.097±0.00 1.002±0.00 8.195±0.00 0.651±0.00 2.769±0.00 3.018±0.19 2.744±0.00 16.437±3.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00079G CIL_00079G_0001 CGP 16:67657512-67662778
CIL_00078Z CIL_00078Z_0001 CGP 16:67660946-67667265

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005634 ISS nucleus
GO:0005829 TAS cytosol
GO:0005886 TAS plasma membrane
GO:0005923 ISS tight junction
GO:0007049 IEA cell cycle
GO:0007179 TAS transforming growth factor beta receptor signaling pathway
GO:0008134 TAS transcription factor binding
GO:0016032 TAS viral process
GO:0017048 ISS Rho GTPase binding
GO:0030742 ISS GTP-dependent protein binding
GO:0034329 TAS cell junction assembly
GO:0042995 IEA cell projection
GO:0045216 TAS cell-cell junction organization
GO:0045217 ISS cell-cell junction maintenance
GO:0051301 IEA cell division
GO:0070830 TAS tight junction assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000093195 Pard6a-201 protein_coding Mus_musculus 0 1519
ENSMUST00000098444 Pard6a-202 protein_coding Mus_musculus 0 1306

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