C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heat shock protein 90, alpha (cytosolic), class A member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000094361 Hsp90aa1-001 ENSMUSG00000021270 10090 - 12:110690605-110696395 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000094361
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000094361 17.447±0.00 5.194±2.21 21.438±11.13 78.336±0.00 9.978±1.42 9.019±1.15 8.484±1.20 20.891±0.22 24.658±26.33 2.695±0.76 23.119±6.50 114.267±57.90 156.560±9.35

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001G1 CIL_0001G1_0002 CGP 12:110690605-110795028

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001764 IEA neuron migration
GO:0002134 IEA UTP binding
GO:0002135 IEA CTP binding
GO:0003009 IEA skeletal muscle contraction
GO:0003729 IEA mRNA binding
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005622 IDA intracellular
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0005739 IEA mitochondrion
GO:0005829 TAS cytosol
GO:0006200 IEA ATP catabolic process
GO:0006457 IEA protein folding
GO:0006809 TAS nitric oxide biosynthetic process
GO:0006986 TAS response to unfolded protein
GO:0009408 IEA response to heat
GO:0009651 IEA response to salt stress
GO:0009986 IEA cell surface
GO:0010592 IEA positive regulation of lamellipodium assembly
GO:0010659 IEA cardiac muscle cell apoptotic process
GO:0016020 IEA membrane
GO:0016323 IEA basolateral plasma membrane
GO:0016324 IEA apical plasma membrane
GO:0016887 IEA ATPase activity
GO:0017098 IEA sulfonylurea receptor binding
GO:0019901 IEA protein kinase binding
GO:0019903 IEA protein phosphatase binding
GO:0023026 IEA MHC class II protein complex binding
GO:0030235 IDA nitric-oxide synthase regulator activity
GO:0030911 ISS TPR domain binding
GO:0031012 IEA extracellular matrix
GO:0031526 IEA brush border membrane
GO:0032564 IEA dATP binding
GO:0033160 IEA positive regulation of protein import into nucleus, translocation
GO:0042026 TAS protein refolding
GO:0042802 IEA identical protein binding
GO:0042803 IDA protein homodimerization activity
GO:0043005 IEA neuron projection
GO:0043025 IEA neuronal cell body
GO:0043234 IEA protein complex
GO:0043627 IEA response to estrogen
GO:0044325 IEA ion channel binding
GO:0044822 IEA poly(A) RNA binding
GO:0045040 IEA protein import into mitochondrial outer membrane
GO:0045429 IDA positive regulation of nitric oxide biosynthetic process
GO:0045585 TAS positive regulation of cytotoxic T cell differentiation
GO:0045793 IEA positive regulation of cell size
GO:0048471 IEA perinuclear region of cytoplasm
GO:0050790 IDA regulation of catalytic activity
GO:0051082 IEA:TAS unfolded protein binding
GO:0051131 IEA chaperone-mediated protein complex assembly
GO:0060452 IEA positive regulation of cardiac muscle contraction
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000216281 HSP90AA1-002 protein_coding Homo_sapiens 0 3035
ENST00000334701 HSP90AA1-001 protein_coding Homo_sapiens 0 2915
ENST00000378770 HSP90AA4P-002 processed_transcript Homo_sapiens 0 529
ENST00000436135 RP11-144L1.8-001 processed_pseudogene Homo_sapiens 0 2161
ENST00000438353 HSP90AA5P-001 transcribed_processed_pseudogene Homo_sapiens 0 1977
ENST00000506634 HSP90AA6P-001 transcribed_processed_pseudogene Homo_sapiens 0 833
ENST00000506915 HSP90AA4P-001 transcribed_processed_pseudogene Homo_sapiens 0 2226
ENST00000530115 RP11-1033A18.1-001 processed_pseudogene Homo_sapiens 0 2719
ENST00000553585 HSP90AA1-005 protein_coding Homo_sapiens 0 385
ENST00000554401 HSP90AA1-003 nonsense_mediated_decay Homo_sapiens 0 1550
ENST00000556554 HSP90AA1-004 retained_intron Homo_sapiens 0 252
ENST00000557234 HSP90AA1-008 nonsense_mediated_decay Homo_sapiens 0 422
ENST00000560130 HSP90AA1-009 retained_intron Homo_sapiens 0 335

Loading