C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GCN1 general control of amino-acid synthesis 1-like 1 (yeast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000094427 Gcn1l1-003 ENSMUSG00000041638 10090 + 5:115605696-115622648 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainColonHeartKidneyLiverMuscleOvaryPlacentaENSMUST00000094427
Transcript ID Adrenal Bladder Brain Colon Heart Kidney Liver Muscle Ovary Placenta
ENSMUST00000094427 3.687±0.00 4.067±1.58 7.061±0.00 3.875±0.21 3.703±0.00 5.160±1.24 3.329±0.93 2.398±0.50 6.183±2.63 7.011±2.41

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZA CIL_0007ZA_0002 VISTA 5:114966986-115567561
CIL_0009CQ CIL_0009CQ_0002 VISTA 5:115188390-115791906
CIL_0004YR CIL_0004YR_0002 CGP 5:115565254-115647736

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000300648 GCN1L1-001 protein_coding Homo_sapiens 0 4043
ENST00000549815 GCN1L1-008 retained_intron Homo_sapiens 0 582

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