C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: syntaphilin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000094456 Snph-002 ENSMUSG00000027457 10090 - 2:151590549-151632549 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000094456
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000094456 0.468±0.07 0.698±0.33 0.230±0.05 3.997±4.23 0.063±0.01 0.607±0.24 0.025±0.01 0.047±0.01 0.010±0.01 0.080±0.01 0.413±0.01 0.516±0.12 0.054±0.03 0.022±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion
GO:0005881 ISS cytoplasmic microtubule
GO:0016021 IEA integral component of membrane
GO:0017075 IEA syntaxin-1 binding
GO:0030054 IEA cell junction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000381867 SNPH-001 protein_coding Homo_sapiens 0 1777
ENST00000381873 SNPH-002 protein_coding Homo_sapiens 0 1973
ENST00000402452 RAD21L1-001 protein_coding Homo_sapiens 0 224
ENST00000614659 SNPH-201 protein_coding Homo_sapiens 0 1777

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