C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coiled-coil domain containing 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000094805 Ccdc8-001 ENSMUSG00000041117 10090 + 7:16992708-16997516 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000094805
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000094805 4.098±2.66 5.759±0.69 4.441±0.30 1.967±1.10 1.215±0.26 1.300±0.16 1.515±0.05 0.504±0.09 1.348±1.18 2.951±0.28 0.372±0.09 19.675±4.62 1.288±0.63 0.836±0.36

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000226 ISS microtubule cytoskeleton organization
GO:0003674 ND molecular_function
GO:0005737 ISS cytoplasm
GO:0005813 ISS centrosome
GO:0005886 IEA plasma membrane
GO:0007088 ISS regulation of mitosis
GO:0010923 IEA negative regulation of phosphatase activity
GO:1990393 ISS 3M complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261700 C14orf166-001 protein_coding Homo_sapiens 0.0001 55
ENST00000263791 EIF2AK4-001 protein_coding Homo_sapiens 0.0001 55
ENST00000307522 CCDC8-001 protein_coding Homo_sapiens 0 900
ENST00000327473 TNFAIP8L1-001 protein_coding Homo_sapiens 0.00007 55
ENST00000459674 LRP8-006 retained_intron Homo_sapiens 0.00006 55
ENST00000480395 TRIM22-002 retained_intron Homo_sapiens 0.00004 55
ENST00000482541 CCNC-005 protein_coding Homo_sapiens 0.0001 53
ENST00000536716 TNFAIP8L1-201 protein_coding Homo_sapiens 0.00007 55
ENST00000558557 EIF2AK4-005 retained_intron Homo_sapiens 0.00004 55
ENST00000558629 EIF2AK4-004 retained_intron Homo_sapiens 0.00008 55
ENST00000558823 EIF2AK4-009 protein_coding Homo_sapiens 0.00001 55
ENST00000560855 EIF2AK4-003 protein_coding Homo_sapiens 0.00009 55
ENST00000569878 HYKK-001 protein_coding Homo_sapiens 0.00007 55
ENST00000574591 DVL2-013 retained_intron Homo_sapiens 0.00001 55
ENST00000609841 RP11-313J2.1-002 processed_transcript Homo_sapiens 0.0001 55

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